RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 IER5Q5VY09 327 aa5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 TMEM130Q8N3G9 435 aa5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 SRA1Q9HD15 236 aaKnown RBP5.88□□□□□ -1.47
HMGB1P30-201ENST00000492455 USP17L5A8MUK1 530 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 F8W735 103 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 DHX15O43143 795 aaKnown RBP5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 DEAF1O75398 565 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 ALX3O95076 343 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 CCDC102BQ68D86 513 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 POTEAQ6S8J7 498 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 DHX32Q7L7V1 743 aaKnown RBP5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 MAP4K3Q8IVH8 894 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 NGLY1Q96IV0 654 aa5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 SMG9Q9H0W8 520 aaKnown RBP5.87□□□□□ -1.47
HMGB1P30-201ENST00000492455 ARID3CA6NKF2 412 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 WNT11O96014 354 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 EIF2AK2P19525 551 aaKnown RBP5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 GPLD1P80108 840 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 MLLT1Q03111 559 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 DEPDC4Q8N2C3 294 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 TRPM4Q8TD43 1214 aa5.86□□□□□ -1.47
HMGB1P30-201ENST00000492455 TGFBR3LH3BV60 316 aa5.85□□□□□ -1.47
HMGB1P30-201ENST00000492455 M0R2N6 131 aa5.85□□□□□ -1.47
HMGB1P30-201ENST00000492455 MED26O95402 600 aa5.85□□□□□ -1.47
HMGB1P30-201ENST00000492455 RARAP10276 462 aa5.85□□□□□ -1.47
HMGB1P30-201ENST00000492455 KRT25Q7Z3Z0 450 aa5.85□□□□□ -1.47
HMGB1P30-201ENST00000492455 POM121CA8CG34 1229 aa5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 RAD21O60216 631 aa5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 STAG2Q8N3U4 1231 aa5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 CHMP7Q8WUX9 453 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 CEP41Q9BYV8 373 aa5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 RBSNQ9H1K0 784 aa5.84□□□□□ -1.47
HMGB1P30-201ENST00000492455 SPINK2P20155 84 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 PLAURQ03405 335 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 NFIAQ12857 509 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 RTN1Q16799 776 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 Q6ZS46 218 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 GAS2L2Q8NHY3 880 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 ADAMTS19Q8TE59 1207 aa5.83□□□□□ -1.48
HMGB1P30-201ENST00000492455 PALM3A6NDB9 673 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 GDF6Q6KF10 455 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZDHHC13Q8IUH4 622 aa5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 AGGF1Q8N302 714 aaeCLIP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 LARGE2Q8N3Y3 721 aa5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 IL22RA1Q8N6P7 574 aa5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 TSEN2Q8NCE0 465 aaKnown RBP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 C2orf49Q9BVC5 232 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 C11orf16Q9NQ32 467 aa5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZNF777Q9ULD5 760 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 KIAA1024Q9UPX6 916 aa5.82□□□□□ -1.48
HMGB1P30-201ENST00000492455 ATAD2Q6PL18 1390 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZBTB42B2RXF5 422 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 GHRHP01286 108 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 ARSDP51689 593 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 NRLP54845 237 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 JAG1P78504 1218 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 UVSSAQ2YD98 709 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 HFE2Q6ZVN8 426 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 DTX1Q86Y01 620 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 SCG3Q8WXD2 468 aaKnown RBP5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 UTP4Q969X6 686 aaKnown RBP5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 PLD4Q96BZ4 506 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 DBNDD2Q9BQY9 259 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 MUC3BQ9H195 1237 aa5.81□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZBTB7BO15156 539 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 SASH3O75995 380 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 TARSP26639 723 aaKnown RBP5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 IDH3AP50213 366 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 CLDN10P78369 228 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 PLEKHM2Q8IWE5 1019 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 CACTIN-AS1Q8N1I8 211 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 OGFOD1Q8N543 542 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 ALG2Q9H553 416 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZFATQ9P243 1243 aa5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 ARID1BQ8NFD5 2236 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P30-201ENST00000492455 USP17L3A6NCW0 530 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 USP17L4A6NCW7 530 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 PSAPP07602 524 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 RNF43Q68DV7 783 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 USP17L2Q6R6M4 530 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 USP17L1Q7RTZ2 530 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 IFT43Q96FT9 208 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 C7orf69Q9H7B7 122 aa5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 ANGEL1Q9UNK9 670 aaKnown RBP5.79□□□□□ -1.48
HMGB1P30-201ENST00000492455 C21orf2O43822 256 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 INPP5BP32019 993 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 TRIM42Q8IWZ5 723 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 SIX5Q8N196 739 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 CCDC82Q8N4S0 544 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 ZNF594Q96JF6 807 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 UBL7Q96S82 380 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 ADGRE2Q9UHX3 823 aa5.78□□□□□ -1.48
HMGB1P30-201ENST00000492455 LOC102724428A0A0B4J2F2 783 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 SIK1P57059 783 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 SETDB1Q15047 1291 aa5.77□□□□□ -1.49
HMGB1P30-201ENST00000492455 OGFOD2Q6N063 350 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms