RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 USPL1Q5W0Q7 1092 aa19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 JARID2Q92833 1246 aaPredicted RBP19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.21■□□□□ 0.67
SEMA4D-220ENST00000492386 PTPN12Q05209 780 aaKnown RBP19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 TNNI3KQ59H18 835 aa19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 FPGT-TNNI3KV9GXZ4 949 aa19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 PDCP20941 246 aa19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 PROSER2Q86WR7 435 aaPredicted RBP19.2■□□□□ 0.66
SEMA4D-220ENST00000492386 KDM4AO75164 1064 aa19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 PIP4K2AP48426 406 aaPredicted RBP19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 TFCP2Q12800 502 aa19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 IFNL2Q8IZJ0 200 aa19.19■□□□□ 0.66
SEMA4D-220ENST00000492386 KRT85P78386 507 aa19.18■□□□□ 0.66
SEMA4D-220ENST00000492386 ELP1O95163 1332 aa19.18■□□□□ 0.66
SEMA4D-220ENST00000492386 FAM173BQ6P4H8 233 aa19.18■□□□□ 0.66
SEMA4D-220ENST00000492386 UBE3BQ7Z3V4 1068 aa19.18■□□□□ 0.66
SEMA4D-220ENST00000492386 MPNDQ8N594 471 aa19.18■□□□□ 0.66
SEMA4D-220ENST00000492386 GLI3P10071 1580 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 PKD1L3Q7Z443 1732 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 C19orf44Q9H6X5 657 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 RFX7Q2KHR2 1363 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 ZNF609O15014 1411 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 CYP27B1O15528 508 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 DCAF5Q96JK2 942 aa19.17■□□□□ 0.66
SEMA4D-220ENST00000492386 LAMB4A4D0S4 1761 aa19.16■□□□□ 0.66
SEMA4D-220ENST00000492386 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
SEMA4D-220ENST00000492386 ZNF830Q96NB3 372 aaPredicted RBP19.16■□□□□ 0.66
SEMA4D-220ENST00000492386 NDUFB9Q9Y6M9 179 aa19.16■□□□□ 0.66
SEMA4D-220ENST00000492386 CASP7P55210 303 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 KRT32Q14532 448 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 UQCRHLA0A096LP55 91 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 AP5Z1O43299 807 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 CHGBP05060 677 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 UQCRHP07919 91 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 DBNDD2Q9BQY9 259 aa19.15■□□□□ 0.66
SEMA4D-220ENST00000492386 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 STK3Q13188 491 aa19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 SASS6Q6UVJ0 657 aa19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 PIBF1Q8WXW3 757 aa19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 HAUS7Q99871 368 aa19.14■□□□□ 0.66
SEMA4D-220ENST00000492386 PLEKHG2Q9H7P9 1386 aa19.14■□□□□ 0.65
SEMA4D-220ENST00000492386 A0A087WZG4 1122 aa19.14■□□□□ 0.65
SEMA4D-220ENST00000492386 LIG1P18858 919 aa19.14■□□□□ 0.65
SEMA4D-220ENST00000492386 TTC12Q9H892 705 aaPredicted RBP19.14■□□□□ 0.65
SEMA4D-220ENST00000492386 CCDC192P0DO97 292 aa19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 CCDC129Q6ZRS4 1044 aa19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 DDX17Q92841 729 aaKnown RBP19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 NEK1Q96PY6 1258 aa19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 SEC62Q99442 399 aaKnown RBP19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 DNAJC2Q99543 621 aaKnown RBP19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 SCAND2PQ9GZW5 306 aaPredicted RBP19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 U3KPZ7 1027 aaPredicted RBP19.13■□□□□ 0.65
SEMA4D-220ENST00000492386 LAMA4Q16363 1823 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 PLBD2Q8NHP8 589 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 CYP21A2P08686 494 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 MCMDC2Q4G0Z9 681 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
SEMA4D-220ENST00000492386 JAK2O60674 1132 aa19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 MAP3K11Q16584 847 aa19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 SPATA32Q96LK8 384 aa19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 TFIP11Q9UBB9 837 aaKnown RBP19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 PARP4Q9UKK3 1724 aaKnown RBP19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 NOLC1Q14978 699 aaKnown RBP eCLIP19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 DDX46Q7L014 1031 aaKnown RBP19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 CABLES1Q8TDN4 633 aa19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 LEO1Q8WVC0 666 aaPredicted RBP19.11■□□□□ 0.65
SEMA4D-220ENST00000492386 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 LMBR1LQ6UX01 489 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 Q6ZUG5 572 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 MRVI1Q9Y6F6 885 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 CABP4P57796 275 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 FOXO4P98177 505 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 CHRNA2Q15822 529 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 CAMK4Q16566 473 aa19.1■□□□□ 0.65
SEMA4D-220ENST00000492386 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 SH3TC1Q8TE82 1336 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 DYNC1I1O14576 645 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 PLCB2Q00722 1185 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 KBTBD3Q8NAB2 608 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 FAM200AQ8TCP9 573 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 DACT1Q9NYF0 836 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 TJP1Q07157 1748 aa19.09■□□□□ 0.65
SEMA4D-220ENST00000492386 H7C1W4 665 aa19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 TYRO3Q06418 890 aa19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 RESTQ13127 1097 aa19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 STOX1Q6ZVD7 989 aa19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 C17orf53Q8N3J3 647 aaPredicted RBP19.08■□□□□ 0.65
SEMA4D-220ENST00000492386 SPTLC3Q9NUV7 552 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms