RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 RAD17O75943 681 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
TREX1-204ENST00000492235 CIAPIN1Q6FI81 312 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 SAPCD2Q86UD0 394 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 MPNDQ8N594 471 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 TAF1P21675 1872 aa16.43■□□□□ 0.22
TREX1-204ENST00000492235 MAP2K2P36507 400 aa16.42■□□□□ 0.22
TREX1-204ENST00000492235 KIAA2012Q0VF49 1180 aa16.42■□□□□ 0.22
TREX1-204ENST00000492235 COPS6Q7L5N1 327 aa16.42■□□□□ 0.22
TREX1-204ENST00000492235 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
TREX1-204ENST00000492235 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
TREX1-204ENST00000492235 HIRAP54198 1017 aaPredicted RBP16.41■□□□□ 0.22
TREX1-204ENST00000492235 RIPK4P57078 832 aa16.41■□□□□ 0.22
TREX1-204ENST00000492235 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
TREX1-204ENST00000492235 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
TREX1-204ENST00000492235 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
TREX1-204ENST00000492235 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
TREX1-204ENST00000492235 TRMT112Q9UI30 125 aaKnown RBP16.41■□□□□ 0.22
TREX1-204ENST00000492235 TNIP1Q15025 636 aa16.4■□□□□ 0.22
TREX1-204ENST00000492235 TRPM4Q8TD43 1214 aa16.4■□□□□ 0.22
TREX1-204ENST00000492235 PGAP2Q9UHJ9 254 aa16.4■□□□□ 0.22
TREX1-204ENST00000492235 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
TREX1-204ENST00000492235 SHTN1A0MZ66 631 aa16.39■□□□□ 0.21
TREX1-204ENST00000492235 YDJCA8MPS7 323 aa16.39■□□□□ 0.21
TREX1-204ENST00000492235 GRAPQ13588 217 aa16.39■□□□□ 0.21
TREX1-204ENST00000492235 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
TREX1-204ENST00000492235 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
TREX1-204ENST00000492235 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
TREX1-204ENST00000492235 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
TREX1-204ENST00000492235 DUOX1Q9NRD9 1551 aa16.38■□□□□ 0.21
TREX1-204ENST00000492235 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
TREX1-204ENST00000492235 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
TREX1-204ENST00000492235 ZC3H15Q8WU90 426 aaKnown RBP16.38■□□□□ 0.21
TREX1-204ENST00000492235 HHIPL1Q96JK4 782 aa16.38■□□□□ 0.21
TREX1-204ENST00000492235 DDX60Q8IY21 1712 aaKnown RBP16.37■□□□□ 0.21
TREX1-204ENST00000492235 CASP8AP2Q9UKL3 1982 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 H7C1D1 291 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 CA12O43570 354 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 MICALL2Q8IY33 904 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
TREX1-204ENST00000492235 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
TREX1-204ENST00000492235 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
TREX1-204ENST00000492235 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
TREX1-204ENST00000492235 BRPF1P55201 1214 aaPredicted RBP16.36■□□□□ 0.21
TREX1-204ENST00000492235 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
TREX1-204ENST00000492235 DLK2Q6UY11 383 aa16.36■□□□□ 0.21
TREX1-204ENST00000492235 MCOLN1Q9GZU1 580 aa16.36■□□□□ 0.21
TREX1-204ENST00000492235 LMOD3Q0VAK6 560 aa16.35■□□□□ 0.21
TREX1-204ENST00000492235 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
TREX1-204ENST00000492235 ZIC5Q96T25 663 aa16.35■□□□□ 0.21
TREX1-204ENST00000492235 PSMD14O00487 310 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 HUNKP57058 714 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 DBNDD1Q9H9R9 158 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
TREX1-204ENST00000492235 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
TREX1-204ENST00000492235 LAS1LQ9Y4W2 734 aaKnown RBP16.34■□□□□ 0.21
TREX1-204ENST00000492235 RGS19P49795 217 aa16.33■□□□□ 0.2
TREX1-204ENST00000492235 NOGQ13253 232 aa16.33■□□□□ 0.2
TREX1-204ENST00000492235 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
TREX1-204ENST00000492235 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
TREX1-204ENST00000492235 FAM89AQ96GI7 184 aa16.33■□□□□ 0.2
TREX1-204ENST00000492235 COL4A1P02462 1669 aa16.33■□□□□ 0.2
TREX1-204ENST00000492235 C6orf229H3BNL8 230 aa16.32■□□□□ 0.2
TREX1-204ENST00000492235 EGFRP00533 1210 aa16.32■□□□□ 0.2
TREX1-204ENST00000492235 POLR2AP24928 1970 aaKnown RBP16.32■□□□□ 0.2
TREX1-204ENST00000492235 DGKZQ13574 1117 aa16.32■□□□□ 0.2
TREX1-204ENST00000492235 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
TREX1-204ENST00000492235 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
TREX1-204ENST00000492235 CCDC146Q8IYE0 955 aa16.32■□□□□ 0.2
TREX1-204ENST00000492235 DPF2Q92785 391 aa16.32■□□□□ 0.2
TREX1-204ENST00000492235 ATP5J2-PTCD1G3V325 749 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 GPSM2P81274 684 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 DOK7Q18PE1 504 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 KRT26Q7Z3Y9 468 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 KCNQ5Q9NR82 932 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 POLLQ9UGP5 575 aa16.31■□□□□ 0.2
TREX1-204ENST00000492235 ADM5C9JUS6 153 aa16.3■□□□□ 0.2
TREX1-204ENST00000492235 CHL1O00533 1208 aa16.3■□□□□ 0.2
TREX1-204ENST00000492235 ECE2O60344 883 aa16.3■□□□□ 0.2
TREX1-204ENST00000492235 SF3B3Q15393 1217 aaKnown RBP16.3■□□□□ 0.2
TREX1-204ENST00000492235 ISCA1Q9BUE6 129 aa16.3■□□□□ 0.2
TREX1-204ENST00000492235 RTL9Q8NET4 1388 aa16.29■□□□□ 0.2
TREX1-204ENST00000492235 RGMBQ6NW40 437 aa16.29■□□□□ 0.2
TREX1-204ENST00000492235 C2orf69Q8N8R5 385 aa16.29■□□□□ 0.2
TREX1-204ENST00000492235 DCPSQ96C86 337 aaKnown RBP16.29■□□□□ 0.2
TREX1-204ENST00000492235 GBA2Q9HCG7 927 aaPredicted RBP16.29■□□□□ 0.2
TREX1-204ENST00000492235 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
TREX1-204ENST00000492235 RPS12P25398 132 aaKnown RBP16.28■□□□□ 0.2
TREX1-204ENST00000492235 RALBP1Q15311 655 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms