RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 PARP10Q53GL7 1025 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 ZNF594Q96JF6 807 aaPredicted RBP13.38□□□□□ -0.27
ATF3-209ENST00000492118 RGPD3A6NKT7 1758 aaPredicted RBP13.38□□□□□ -0.27
ATF3-209ENST00000492118 RGPD4Q7Z3J3 1758 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 UTYO14607 1347 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
ATF3-209ENST00000492118 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
ATF3-209ENST00000492118 MMP10P09238 476 aa13.37□□□□□ -0.27
ATF3-209ENST00000492118 DDR1Q08345 913 aa13.37□□□□□ -0.27
ATF3-209ENST00000492118 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
ATF3-209ENST00000492118 RPAP2Q8IXW5 612 aaPredicted RBP13.37□□□□□ -0.27
ATF3-209ENST00000492118 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
ATF3-209ENST00000492118 SURF6O75683 361 aaKnown RBP13.37□□□□□ -0.27
ATF3-209ENST00000492118 OS9Q13438 667 aaPredicted RBP13.37□□□□□ -0.27
ATF3-209ENST00000492118 HMMRO75330 724 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 SERPINB2P05120 415 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 RGS3P49796 1198 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 ANKRD45Q5TZF3 282 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 FLAD1Q8NFF5 587 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 RBM10P98175 930 aaKnown RBP13.36□□□□□ -0.27
ATF3-209ENST00000492118 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
ATF3-209ENST00000492118 CENPQQ7L2Z9 268 aaPredicted RBP13.36□□□□□ -0.27
ATF3-209ENST00000492118 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 GREM2Q9H772 168 aa13.36□□□□□ -0.27
ATF3-209ENST00000492118 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
ATF3-209ENST00000492118 CTSWP56202 376 aa13.35□□□□□ -0.27
ATF3-209ENST00000492118 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
ATF3-209ENST00000492118 CARMIL3Q8ND23 1372 aa13.35□□□□□ -0.27
ATF3-209ENST00000492118 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
ATF3-209ENST00000492118 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 POLRMTO00411 1230 aaKnown RBP13.34□□□□□ -0.27
ATF3-209ENST00000492118 PDE8AO60658 829 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 TM4SF1P30408 202 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 PRR5LQ6MZQ0 368 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 HDAC5Q9UQL6 1122 aa13.34□□□□□ -0.27
ATF3-209ENST00000492118 ITGA6P23229 1130 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 CCDC57Q2TAC2 916 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 SSH3Q8TE77 659 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 TAF1P21675 1872 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 C16orf71Q8IYS4 520 aaPredicted RBP13.33□□□□□ -0.28
ATF3-209ENST00000492118 PUS3Q9BZE2 481 aaKnown RBP13.33□□□□□ -0.28
ATF3-209ENST00000492118 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
ATF3-209ENST00000492118 IFIT5Q13325 482 aaKnown RBP13.32□□□□□ -0.28
ATF3-209ENST00000492118 POLA2Q14181 598 aa13.32□□□□□ -0.28
ATF3-209ENST00000492118 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
ATF3-209ENST00000492118 GLIPR1L2Q4G1C9 344 aa13.32□□□□□ -0.28
ATF3-209ENST00000492118 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
ATF3-209ENST00000492118 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
ATF3-209ENST00000492118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.32□□□□□ -0.28
ATF3-209ENST00000492118 CDHR2Q9BYE9 1310 aa13.32□□□□□ -0.28
ATF3-209ENST00000492118 SLC51AQ86UW1 340 aa13.31□□□□□ -0.28
ATF3-209ENST00000492118 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
ATF3-209ENST00000492118 ST5P78524 1137 aa13.31□□□□□ -0.28
ATF3-209ENST00000492118 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
ATF3-209ENST00000492118 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
ATF3-209ENST00000492118 NLRP3Q96P20 1036 aa13.31□□□□□ -0.28
ATF3-209ENST00000492118 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
ATF3-209ENST00000492118 RFX5P48382 616 aaPredicted RBP13.3□□□□□ -0.28
ATF3-209ENST00000492118 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
ATF3-209ENST00000492118 MTX1Q13505 466 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 OTUD7AQ8TE49 926 aaPredicted RBP13.3□□□□□ -0.28
ATF3-209ENST00000492118 MYH3P11055 1940 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 DDX60Q8IY21 1712 aaKnown RBP13.3□□□□□ -0.28
ATF3-209ENST00000492118 CCDC152Q4G0S7 254 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 TSHZ3Q63HK5 1081 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
ATF3-209ENST00000492118 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
ATF3-209ENST00000492118 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
ATF3-209ENST00000492118 CSF1RP07333 972 aa13.29□□□□□ -0.28
ATF3-209ENST00000492118 CHD1LQ86WJ1 897 aa13.29□□□□□ -0.28
ATF3-209ENST00000492118 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
ATF3-209ENST00000492118 LDHAL6AQ6ZMR3 332 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 NUCB1Q02818 461 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 TFCP2Q12800 502 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
ATF3-209ENST00000492118 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 COL4A1P02462 1669 aa13.28□□□□□ -0.28
ATF3-209ENST00000492118 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
ATF3-209ENST00000492118 SNAP23O00161 211 aa13.27□□□□□ -0.28
ATF3-209ENST00000492118 SASH1O94885 1247 aa13.27□□□□□ -0.28
ATF3-209ENST00000492118 PDE4AP27815 886 aa13.27□□□□□ -0.28
ATF3-209ENST00000492118 RHPN1Q8TCX5 695 aa13.27□□□□□ -0.28
ATF3-209ENST00000492118 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.28
ATF3-209ENST00000492118 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
ATF3-209ENST00000492118 SPEF2Q9C093 1822 aa13.27□□□□□ -0.29
ATF3-209ENST00000492118 RGL2O15211 777 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms