RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 IL13P35225 146 aa12.45□□□□□ -0.42
NCKAP1-206ENST00000492058 PNMA8AQ86V59 439 aaPredicted RBP12.45□□□□□ -0.42
NCKAP1-206ENST00000492058 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 A1BGP04217 495 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 FMR1Q06787 632 aaKnown RBP eCLIP12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 CAPNS2Q96L46 248 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 GJA3Q9Y6H8 435 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 NRXN2Q9P2S2 1712 aa12.44□□□□□ -0.42
NCKAP1-206ENST00000492058 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 CYP4F22Q6NT55 531 aa12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
NCKAP1-206ENST00000492058 RGS20O76081 388 aa12.42□□□□□ -0.42
NCKAP1-206ENST00000492058 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
NCKAP1-206ENST00000492058 PPP1R15BQ5SWA1 713 aa12.42□□□□□ -0.42
NCKAP1-206ENST00000492058 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
NCKAP1-206ENST00000492058 C7orf43Q8WVR3 580 aa12.42□□□□□ -0.42
NCKAP1-206ENST00000492058 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 AOC2O75106 756 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 NPR1P16066 1061 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 ECE1P42892 770 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 RGS19P49795 217 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 TEFQ10587 303 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 DZIP3Q86Y13 1208 aaKnown RBP12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 RTKN2Q8IZC4 609 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 DICER1Q9UPY3 1922 aaKnown RBP12.41□□□□□ -0.42
NCKAP1-206ENST00000492058 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 TRAF5O00463 557 aa12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.42
NCKAP1-206ENST00000492058 PDE4AP27815 886 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 FOSBP53539 338 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 EIF6P56537 245 aaKnown RBP12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 ZNF790Q6PG37 636 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 GPC2Q8N158 579 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 CRISPLD2Q9H0B8 497 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
NCKAP1-206ENST00000492058 COL11A2P13942 1736 aaPredicted RBP12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 FZD9O00144 591 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 EPS15P42566 896 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 CST9Q5W186 159 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 TPTE2Q6XPS3 522 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 THSD4Q6ZMP0 1018 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 WNT2BQ93097 391 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 NBPF3Q9H094 633 aa12.38□□□□□ -0.43
NCKAP1-206ENST00000492058 SCN4AP35499 1836 aa12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 DGKZQ13574 1117 aa12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 HEG1Q9ULI3 1381 aa12.37□□□□□ -0.43
NCKAP1-206ENST00000492058 BHMG1C9JSJ3 638 aaPredicted RBP12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 KCNQ3O43525 872 aa12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 NIP7Q9Y221 180 aaKnown RBP eCLIP12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
NCKAP1-206ENST00000492058 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 MAP2K2P36507 400 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 ZDHHC16Q969W1 377 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 ZNF408Q9H9D4 720 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 ZNF652Q9Y2D9 606 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
NCKAP1-206ENST00000492058 MRC1P22897 1456 aa12.34□□□□□ -0.43
NCKAP1-206ENST00000492058 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
NCKAP1-206ENST00000492058 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
NCKAP1-206ENST00000492058 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
NCKAP1-206ENST00000492058 ZBED2Q9BTP6 218 aa12.34□□□□□ -0.43
NCKAP1-206ENST00000492058 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
NCKAP1-206ENST00000492058 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
NCKAP1-206ENST00000492058 CLEC4GQ6UXB4 293 aa12.33□□□□□ -0.44
NCKAP1-206ENST00000492058 KLRG2A4D1S0 409 aaPredicted RBP12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 EVI5O60447 810 aa12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 HSPA5P11021 654 aaKnown RBP12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 SCNN1DP51172 638 aa12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 SOX10P56693 466 aa12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 NGEFQ8N5V2 710 aa12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 PSMD1Q99460 953 aa12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
NCKAP1-206ENST00000492058 CA12O43570 354 aa12.31□□□□□ -0.44
NCKAP1-206ENST00000492058 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms