RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 SCNN1DP51172 638 aa19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 EIF6P56537 245 aaKnown RBP19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 TWISTNBQ3B726 338 aaPredicted RBP19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 PLBD2Q8NHP8 589 aa19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 CNTNAP1P78357 1384 aa19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 EXOSC9Q06265 439 aaKnown RBP19.28■□□□□ 0.68
CDC42SE1-205ENST00000491825 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
CDC42SE1-205ENST00000491825 ISCA1Q9BUE6 129 aa19.28■□□□□ 0.68
CDC42SE1-205ENST00000491825 DBF4Q9UBU7 674 aaPredicted RBP19.28■□□□□ 0.68
CDC42SE1-205ENST00000491825 MKRN1Q9UHC7 482 aaKnown RBP19.28■□□□□ 0.68
CDC42SE1-205ENST00000491825 LAMB2P55268 1798 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 PPIP5K2O43314 1243 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 BBOX1O75936 387 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 AOC3Q16853 763 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 SP8Q8IXZ3 490 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 GJA3Q9Y6H8 435 aa19.27■□□□□ 0.68
CDC42SE1-205ENST00000491825 CACNA1FO60840 1977 aa19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 ELL2O00472 640 aaPredicted RBP19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 GRAPQ13588 217 aa19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 ANKRD13DQ6ZTN6 518 aa19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 NIM1KQ8IY84 436 aa19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 GRAPLQ8TC17 118 aaPredicted RBP19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 DUOX1Q9NRD9 1551 aa19.26■□□□□ 0.67
CDC42SE1-205ENST00000491825 TMEM88BA6NKF7 163 aa19.25■□□□□ 0.67
CDC42SE1-205ENST00000491825 EPS15P42566 896 aa19.25■□□□□ 0.67
CDC42SE1-205ENST00000491825 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
CDC42SE1-205ENST00000491825 CNTROBQ8N137 903 aa19.25■□□□□ 0.67
CDC42SE1-205ENST00000491825 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
CDC42SE1-205ENST00000491825 VAMP4O75379 141 aa19.24■□□□□ 0.67
CDC42SE1-205ENST00000491825 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
CDC42SE1-205ENST00000491825 ZNF428Q96B54 188 aa19.24■□□□□ 0.67
CDC42SE1-205ENST00000491825 TMX4Q9H1E5 349 aaPredicted RBP19.24■□□□□ 0.67
CDC42SE1-205ENST00000491825 HYPKQ9NX55 129 aa19.24■□□□□ 0.67
CDC42SE1-205ENST00000491825 LRRC37AA6NMS7 1700 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 ATP5J2-PTCD1G3V325 749 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 LMOD1P29536 600 aaPredicted RBP19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 KIAA2012Q0VF49 1180 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 DPP8Q6V1X1 898 aaPredicted RBP19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 MPNDQ8N594 471 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 SUPT20HQ8NEM7 779 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 COL4A1P02462 1669 aa19.23■□□□□ 0.67
CDC42SE1-205ENST00000491825 CXCL9Q07325 125 aa19.22■□□□□ 0.67
CDC42SE1-205ENST00000491825 SF3B3Q15393 1217 aaKnown RBP19.22■□□□□ 0.67
CDC42SE1-205ENST00000491825 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
CDC42SE1-205ENST00000491825 ZNRF3Q9ULT6 936 aa19.22■□□□□ 0.67
CDC42SE1-205ENST00000491825 RASSF10A6NK89 507 aa19.21■□□□□ 0.67
CDC42SE1-205ENST00000491825 USP50Q70EL3 339 aaPredicted RBP19.21■□□□□ 0.67
CDC42SE1-205ENST00000491825 TMC4Q7Z404 712 aa19.21■□□□□ 0.67
CDC42SE1-205ENST00000491825 GPRC5DQ9NZD1 345 aa19.21■□□□□ 0.67
CDC42SE1-205ENST00000491825 VEGFBP49765 207 aa19.2■□□□□ 0.66
CDC42SE1-205ENST00000491825 CELF1Q92879 486 aaKnown RBP19.2■□□□□ 0.66
CDC42SE1-205ENST00000491825 STK31Q9BXU1 1019 aa19.2■□□□□ 0.66
CDC42SE1-205ENST00000491825 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
CDC42SE1-205ENST00000491825 YDJCA8MPS7 323 aa19.18■□□□□ 0.66
CDC42SE1-205ENST00000491825 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
CDC42SE1-205ENST00000491825 ADARB2Q9NS39 739 aaKnown RBP19.18■□□□□ 0.66
CDC42SE1-205ENST00000491825 CDHR2Q9BYE9 1310 aa19.18■□□□□ 0.66
CDC42SE1-205ENST00000491825 IRS4O14654 1257 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE1-205ENST00000491825 GMPSP49915 693 aaPredicted RBP19.17■□□□□ 0.66
CDC42SE1-205ENST00000491825 CIAPIN1Q6FI81 312 aa19.17■□□□□ 0.66
CDC42SE1-205ENST00000491825 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
CDC42SE1-205ENST00000491825 RTL5Q5HYW3 569 aaPredicted RBP19.16■□□□□ 0.66
CDC42SE1-205ENST00000491825 ZBTB38Q8NAP3 1195 aaPredicted RBP19.16■□□□□ 0.66
CDC42SE1-205ENST00000491825 TAF1P21675 1872 aa19.16■□□□□ 0.66
CDC42SE1-205ENST00000491825 FOXN1O15353 648 aa19.15■□□□□ 0.66
CDC42SE1-205ENST00000491825 RAD17O75943 681 aa19.15■□□□□ 0.66
CDC42SE1-205ENST00000491825 ALDH1L2Q3SY69 923 aa19.15■□□□□ 0.66
CDC42SE1-205ENST00000491825 RIC3Q7Z5B4 369 aa19.15■□□□□ 0.66
CDC42SE1-205ENST00000491825 TRAF5O00463 557 aa19.14■□□□□ 0.65
CDC42SE1-205ENST00000491825 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
CDC42SE1-205ENST00000491825 DEFB115Q30KQ5 88 aa19.14■□□□□ 0.65
CDC42SE1-205ENST00000491825 POLLQ9UGP5 575 aa19.14■□□□□ 0.65
CDC42SE1-205ENST00000491825 PGAP2Q9UHJ9 254 aa19.14■□□□□ 0.65
CDC42SE1-205ENST00000491825 GPSM2P81274 684 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 TNIP1Q15025 636 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 CST9Q5W186 159 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 MYD88Q99836 296 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 WBP1LQ9NX94 342 aa19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
CDC42SE1-205ENST00000491825 THSD7BQ9C0I4 1608 aa19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 PCCAP05165 728 aaPredicted RBP19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 HIRAP54198 1017 aaPredicted RBP19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 FLIIQ13045 1269 aa19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 TRPM4Q8TD43 1214 aa19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 SEC31BQ9NQW1 1179 aa19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 ABT1Q9ULW3 272 aaKnown RBP19.12■□□□□ 0.65
CDC42SE1-205ENST00000491825 WDR33Q9C0J8 1336 aaKnown RBP19.11■□□□□ 0.65
CDC42SE1-205ENST00000491825 SHTN1A0MZ66 631 aa19.11■□□□□ 0.65
CDC42SE1-205ENST00000491825 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
CDC42SE1-205ENST00000491825 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
CDC42SE1-205ENST00000491825 RPS8P62241 208 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms