RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 CRAMP1Q96RY5 1269 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 DICER1Q9UPY3 1922 aaKnown RBP11.85□□□□□ -0.51
BRCA1-219ENST00000491747 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
BRCA1-219ENST00000491747 ABCC4O15439 1325 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
BRCA1-219ENST00000491747 GCKRQ14397 625 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 H7C1W4 665 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
BRCA1-219ENST00000491747 C9orf131Q5VYM1 1079 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 LINS1Q8NG48 757 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 TIAM2Q8IVF5 1701 aa11.84□□□□□ -0.51
BRCA1-219ENST00000491747 CASP7P55210 303 aa11.83□□□□□ -0.52
BRCA1-219ENST00000491747 ZNF784Q8NCA9 323 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-219ENST00000491747 CDHR2Q9BYE9 1310 aa11.83□□□□□ -0.52
BRCA1-219ENST00000491747 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-219ENST00000491747 RARSP54136 660 aaKnown RBP11.83□□□□□ -0.52
BRCA1-219ENST00000491747 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
BRCA1-219ENST00000491747 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
BRCA1-219ENST00000491747 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-219ENST00000491747 PDE8AO60658 829 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 SLC4A10Q6U841 1118 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 UBE3BQ7Z3V4 1068 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 CCDC93Q567U6 631 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
BRCA1-219ENST00000491747 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
BRCA1-219ENST00000491747 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-219ENST00000491747 SEC31BQ9NQW1 1179 aa11.82□□□□□ -0.52
BRCA1-219ENST00000491747 GRAPQ13588 217 aa11.81□□□□□ -0.52
BRCA1-219ENST00000491747 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-219ENST00000491747 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
BRCA1-219ENST00000491747 PTPRCP08575 1304 aa11.81□□□□□ -0.52
BRCA1-219ENST00000491747 LMNB1P20700 586 aa11.81□□□□□ -0.52
BRCA1-219ENST00000491747 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
BRCA1-219ENST00000491747 LTBP3Q9NS15 1303 aa11.8□□□□□ -0.52
BRCA1-219ENST00000491747 BCAR3O75815 825 aa11.8□□□□□ -0.52
BRCA1-219ENST00000491747 BRPF1P55201 1214 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-219ENST00000491747 SOGA3Q5TF21 947 aa11.8□□□□□ -0.52
BRCA1-219ENST00000491747 TTLL11Q8NHH1 800 aa11.8□□□□□ -0.52
BRCA1-219ENST00000491747 ATP6V0A2Q9Y487 856 aa11.8□□□□□ -0.52
BRCA1-219ENST00000491747 BBOX1O75936 387 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
BRCA1-219ENST00000491747 SRCIN1Q9C0H9 1055 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 COL4A5P29400 1685 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 CTSWP56202 376 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 ZNF526Q8TF50 670 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-219ENST00000491747 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-219ENST00000491747 LTBP1Q14766 1721 aa11.79□□□□□ -0.52
BRCA1-219ENST00000491747 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 CRBNQ96SW2 442 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 PLA2G12BQ9BX93 195 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 GREM2Q9H772 168 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 DUOX1Q9NRD9 1551 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 PLIN1O60240 522 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 FOXO4P98177 505 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 CCDC152Q4G0S7 254 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 EPHA10Q5JZY3 1008 aa11.78□□□□□ -0.52
BRCA1-219ENST00000491747 GRM8O00222 908 aa11.77□□□□□ -0.52
BRCA1-219ENST00000491747 NBPF7P0C2Y1 421 aaPredicted RBP11.77□□□□□ -0.52
BRCA1-219ENST00000491747 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.52
BRCA1-219ENST00000491747 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.52
BRCA1-219ENST00000491747 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.52
BRCA1-219ENST00000491747 PSMD1Q99460 953 aa11.77□□□□□ -0.52
BRCA1-219ENST00000491747 CSF1RP07333 972 aa11.77□□□□□ -0.53
BRCA1-219ENST00000491747 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
BRCA1-219ENST00000491747 UTYO14607 1347 aa11.76□□□□□ -0.53
BRCA1-219ENST00000491747 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-219ENST00000491747 IARSP41252 1262 aaKnown RBP11.76□□□□□ -0.53
BRCA1-219ENST00000491747 SUCLG2Q96I99 432 aa11.76□□□□□ -0.53
BRCA1-219ENST00000491747 RTL9Q8NET4 1388 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 GPSM2P81274 684 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 FAM161AQ3B820 660 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 MPNDQ8N594 471 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-219ENST00000491747 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 A0A1B0GUL6 1792 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 CENPQQ7L2Z9 268 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-219ENST00000491747 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
BRCA1-219ENST00000491747 KIF16BQ96L93 1317 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 ITGA6P23229 1130 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 LMBR1LQ6UX01 489 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 DPP8Q6V1X1 898 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 ARHGAP45Q92619 1136 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 GPBP1L1Q9HC44 474 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 WTIPA6NIX2 430 aaPredicted RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 TRIM27P14373 513 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 ANKRD18AQ8IVF6 992 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms