RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 TMPRSS4Q9NRS4 437 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 MAP4K5Q9Y4K4 846 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 PCDHB11Q9Y5F2 797 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 SCAF11Q99590 1463 aaKnown RBP6.16□□□□□ -1.42
CLIP4-211ENST00000491701 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.16□□□□□ -1.42
CLIP4-211ENST00000491701 PLEKHH1Q9ULM0 1364 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 SKIP12755 728 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
CLIP4-211ENST00000491701 OXLD1Q5BKU9 147 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 RNF20Q5VTR2 975 aa6.16□□□□□ -1.42
CLIP4-211ENST00000491701 CHD2O14647 1828 aaKnown RBP6.15□□□□□ -1.42
CLIP4-211ENST00000491701 MYOM1P52179 1685 aa6.15□□□□□ -1.42
CLIP4-211ENST00000491701 CEP170BQ9Y4F5 1589 aaPredicted RBP6.15□□□□□ -1.43
CLIP4-211ENST00000491701 ROCK2O75116 1388 aaKnown RBP6.15□□□□□ -1.43
CLIP4-211ENST00000491701 ERVH48-1M5A8F1 160 aa6.15□□□□□ -1.43
CLIP4-211ENST00000491701 PIK3CDO00329 1044 aa6.15□□□□□ -1.43
CLIP4-211ENST00000491701 UPP2O95045 317 aa6.15□□□□□ -1.43
CLIP4-211ENST00000491701 DHX9Q08211 1270 aaKnown RBP6.15□□□□□ -1.43
CLIP4-211ENST00000491701 CCDC184Q52MB2 194 aa6.15□□□□□ -1.43
CLIP4-211ENST00000491701 PPP1R26Q5T8A7 1209 aaPredicted RBP6.15□□□□□ -1.43
CLIP4-211ENST00000491701 CYLDQ9NQC7 956 aa6.15□□□□□ -1.43
CLIP4-211ENST00000491701 STRCP1A6NGW2 1772 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 YTHDC2Q9H6S0 1430 aaKnown RBP6.14□□□□□ -1.43
CLIP4-211ENST00000491701 LRPPRCP42704 1394 aaKnown RBP6.14□□□□□ -1.43
CLIP4-211ENST00000491701 ABCC11Q96J66 1382 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 PLEKHG1Q9ULL1 1385 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 NCLP19338 710 aaKnown RBP6.14□□□□□ -1.43
CLIP4-211ENST00000491701 TSGA10IPQ3SY00 556 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 NOM1Q5C9Z4 860 aaKnown RBP6.14□□□□□ -1.43
CLIP4-211ENST00000491701 DEPDC4Q8N2C3 294 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 UCN2Q96RP3 112 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 PGPEP1Q9NXJ5 209 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 DOLKQ9UPQ8 538 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 TBX22Q9Y458 520 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 LTBP4Q8N2S1 1624 aa6.14□□□□□ -1.43
CLIP4-211ENST00000491701 TULP4Q9NRJ4 1543 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 KNDC1Q76NI1 1749 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 RNF225M0QZC1 329 aaPredicted RBP6.13□□□□□ -1.43
CLIP4-211ENST00000491701 ZNF385CQ66K41 422 aaPredicted RBP6.13□□□□□ -1.43
CLIP4-211ENST00000491701 WAPLQ7Z5K2 1190 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 GIPC2Q8TF65 315 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 UBXN4Q92575 508 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 COL25A1Q9BXS0 654 aaPredicted RBP6.13□□□□□ -1.43
CLIP4-211ENST00000491701 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
CLIP4-211ENST00000491701 TRAK1Q9UPV9 953 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 MAFBQ9Y5Q3 323 aaPredicted RBP6.13□□□□□ -1.43
CLIP4-211ENST00000491701 EMILIN1Q9Y6C2 1016 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 DLC1Q96QB1 1528 aa6.13□□□□□ -1.43
CLIP4-211ENST00000491701 TECPR2O15040 1411 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 SBNO2Q9Y2G9 1366 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 QRICH2Q9H0J4 1663 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 ESPNB1AK53 854 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 ARID4AP29374 1257 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 ZC3H6P61129 1189 aaKnown RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 PTSQ03393 145 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 CBLBQ13191 982 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 RNFT1Q5M7Z0 435 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 PHLDB3Q6NSJ2 640 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 TBC1D9Q6ZT07 1266 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 THEMISQ8N1K5 641 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 ZNF784Q8NCA9 323 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 WHAMMQ8TF30 809 aa6.12□□□□□ -1.43
CLIP4-211ENST00000491701 CCDC85AQ96PX6 553 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 CDCA7Q9BWT1 371 aaPredicted RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 XRN1Q8IZH2 1706 aaKnown RBP6.12□□□□□ -1.43
CLIP4-211ENST00000491701 ROBO2Q9HCK4 1378 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 TTLL8A6PVC2 850 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 MYCP01106 439 aaPredicted RBP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 VAMP1P23763 118 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 ELOAQ14241 798 aaKnown RBP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 SEPT12Q8IYM1 358 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 ANKRD13AQ8IZ07 590 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 PLPP7Q8NBV4 271 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 SLC26A8Q96RN1 970 aa6.11□□□□□ -1.43
CLIP4-211ENST00000491701 TSEN34Q9BSV6 310 aaKnown RBP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 RGPD8O14715 1765 aaPredicted RBP6.11□□□□□ -1.43
CLIP4-211ENST00000491701 CD163L1Q9NR16 1453 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 MARSP56192 900 aaKnown RBP6.1□□□□□ -1.43
CLIP4-211ENST00000491701 RELBQ01201 579 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 DHX37Q8IY37 1157 aaKnown RBP6.1□□□□□ -1.43
CLIP4-211ENST00000491701 SVOPQ8N4V2 548 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 NANOS1Q8WY41 292 aaKnown RBP6.1□□□□□ -1.43
CLIP4-211ENST00000491701 AGBL1Q96MI9 1066 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 STK26Q9P289 416 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
CLIP4-211ENST00000491701 XIRP1Q702N8 1843 aaKnown RBP6.1□□□□□ -1.43
CLIP4-211ENST00000491701 PRR36Q9H6K5 1346 aa6.1□□□□□ -1.43
CLIP4-211ENST00000491701 USP32Q8NFA0 1604 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 SOWAHDA6NJG2 315 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 BRD2P25440 801 aaKnown RBP6.09□□□□□ -1.43
CLIP4-211ENST00000491701 IRS1P35568 1242 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 SCTRP47872 440 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 TMEM164Q5U3C3 297 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 GPAT2Q6NUI2 795 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 ILDR2Q71H61 639 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 CCDC155Q8N6L0 562 aa6.09□□□□□ -1.43
CLIP4-211ENST00000491701 CPS1P31327 1500 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms