RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 DCTN4Q9UJW0 460 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 HCN2Q9UL51 889 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 BRPF3Q9ULD4 1205 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 POLIQ9UNA4 740 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 USP20Q9Y2K6 914 aa7.13□□□□□ -1.27
RTN4-215ENST00000491592 ADAM23O75077 832 aa7.12□□□□□ -1.27
RTN4-215ENST00000491592 SFSWAPQ12872 951 aaKnown RBP7.12□□□□□ -1.27
RTN4-215ENST00000491592 PIK3R5Q8WYR1 880 aa7.12□□□□□ -1.27
RTN4-215ENST00000491592 CFHR5Q9BXR6 569 aa7.12□□□□□ -1.27
RTN4-215ENST00000491592 KCNH4Q9UQ05 1017 aa7.12□□□□□ -1.27
RTN4-215ENST00000491592 OIP5O43482 229 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 PCSK2P16519 638 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 GJD3Q8N144 294 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 GALNT6Q8NCL4 622 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 PUS7Q96PZ0 661 aaKnown RBP7.11□□□□□ -1.27
RTN4-215ENST00000491592 MARK1Q9P0L2 795 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 KCNMB2Q9Y691 235 aa7.11□□□□□ -1.27
RTN4-215ENST00000491592 IGSF3O75054 1194 aa7.1□□□□□ -1.27
RTN4-215ENST00000491592 USP5P45974 858 aa7.1□□□□□ -1.27
RTN4-215ENST00000491592 GRIN2CQ14957 1233 aa7.1□□□□□ -1.27
RTN4-215ENST00000491592 FAM182BQ5T319 152 aa7.1□□□□□ -1.27
RTN4-215ENST00000491592 ALYREFQ86V81 257 aaKnown RBP7.1□□□□□ -1.27
RTN4-215ENST00000491592 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
RTN4-215ENST00000491592 OXCT2Q9BYC2 517 aaPredicted RBP7.1□□□□□ -1.27
RTN4-215ENST00000491592 RBCK1Q9BYM8 510 aa7.1□□□□□ -1.27
RTN4-215ENST00000491592 XYLBO75191 536 aa7.09□□□□□ -1.27
RTN4-215ENST00000491592 RPLP1P05386 114 aaKnown RBP7.09□□□□□ -1.27
RTN4-215ENST00000491592 MFAP1P55081 439 aaKnown RBP7.09□□□□□ -1.27
RTN4-215ENST00000491592 SPEM2Q0P670 501 aa7.09□□□□□ -1.27
RTN4-215ENST00000491592 FAM129BQ96TA1 746 aa7.09□□□□□ -1.27
RTN4-215ENST00000491592 UBAP1LF5GYI3 381 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 EGFRP00533 1210 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 CTBSQ01459 385 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 RAB44Q7Z6P3 723 aaPredicted RBP7.08□□□□□ -1.28
RTN4-215ENST00000491592 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 SLC30A3Q99726 388 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 GDF2Q9UK05 429 aaPredicted RBP7.08□□□□□ -1.28
RTN4-215ENST00000491592 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
RTN4-215ENST00000491592 A6NHS1 94 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 GPR182O15218 404 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 PROCP04070 461 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 ITGB2P05107 769 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 BMP4P12644 408 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 CCINQ13939 588 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 C8orf34Q49A92 452 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 DNAJC14Q6Y2X3 702 aaPredicted RBP7.07□□□□□ -1.28
RTN4-215ENST00000491592 KRT25Q7Z3Z0 450 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 TMC7Q7Z402 723 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 TTC16Q8NEE8 873 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 ASB16Q96NS5 453 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 GSX2Q9BZM3 304 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 C11orf16Q9NQ32 467 aa7.07□□□□□ -1.28
RTN4-215ENST00000491592 FNDC3AQ9Y2H6 1198 aaKnown RBP7.07□□□□□ -1.28
RTN4-215ENST00000491592 IGHA2P01877 340 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 EHHADHQ08426 723 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 PDE12Q6L8Q7 609 aaKnown RBP7.06□□□□□ -1.28
RTN4-215ENST00000491592 ZNF438Q7Z4V0 828 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 ZSCAN29Q8IWY8 852 aaPredicted RBP7.06□□□□□ -1.28
RTN4-215ENST00000491592 TMC1Q8TDI8 760 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 PNMA5Q96PV4 448 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 CHMP4AQ9BY43 222 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 GGNBP2Q9H3C7 697 aa7.06□□□□□ -1.28
RTN4-215ENST00000491592 PIK3R2O00459 728 aa7.05□□□□□ -1.28
RTN4-215ENST00000491592 NFKB1P19838 968 aa7.05□□□□□ -1.28
RTN4-215ENST00000491592 ZNF468Q5VIY5 522 aaPredicted RBP7.05□□□□□ -1.28
RTN4-215ENST00000491592 EDARADDQ8WWZ3 215 aa7.05□□□□□ -1.28
RTN4-215ENST00000491592 BHMTQ93088 406 aa7.05□□□□□ -1.28
RTN4-215ENST00000491592 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.05□□□□□ -1.28
RTN4-215ENST00000491592 K7ELQ4 463 aaPredicted RBP7.04□□□□□ -1.28
RTN4-215ENST00000491592 C2CD2LO14523 706 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 SASH3O75995 380 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 RARAP10276 462 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
RTN4-215ENST00000491592 NEUROD1Q13562 356 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 NLRP13Q86W25 1043 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 GOLGA6L1Q8N7Z2 621 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 SNX29Q8TEQ0 813 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 ALKBH8Q96BT7 664 aaKnown RBP7.04□□□□□ -1.28
RTN4-215ENST00000491592 EFCC1Q9HA90 598 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 RRAGCQ9HB90 399 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 TMEM63CQ9P1W3 806 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 ZFATQ9P243 1243 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 PRR12Q9ULL5 1215 aa7.04□□□□□ -1.28
RTN4-215ENST00000491592 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 TREHO43280 583 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 XP32Q5T750 250 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 ELP3Q9H9T3 547 aa7.03□□□□□ -1.28
RTN4-215ENST00000491592 AVENQ9NQS1 362 aaPredicted RBP7.03□□□□□ -1.28
RTN4-215ENST00000491592 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
RTN4-215ENST00000491592 KRBA1A5PL33 1030 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 SHISA8B8ZZ34 492 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 TNFRSF21O75509 655 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 ARAFP10398 606 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 TARSP26639 723 aaKnown RBP7.02□□□□□ -1.29
RTN4-215ENST00000491592 BAG6P46379 1132 aa7.02□□□□□ -1.29
RTN4-215ENST00000491592 FMR1Q06787 632 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms