RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 ANXA1P04083 346 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 HOXB7P09629 217 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 GRAPQ13588 217 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 TNIP1Q15025 636 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 CIAPIN1Q6FI81 312 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 DPP8Q6V1X1 898 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 SAPCD2Q86UD0 394 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 GRAPLQ8TC17 118 aaPredicted RBP11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
APOBEC3F-204ENST00000491387 LRRC37AA6NMS7 1700 aa11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 TRAF5O00463 557 aa11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 GMPSP49915 693 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 SF3B3Q15393 1217 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 DDX46Q7L014 1031 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 GPR101Q96P66 508 aaPredicted RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 TRMT112Q9UI30 125 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 DUOX1Q9NRD9 1551 aa11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 DDX60Q8IY21 1712 aaKnown RBP11.06□□□□□ -0.64
APOBEC3F-204ENST00000491387 CA12O43570 354 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 HIRAP54198 1017 aaPredicted RBP11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 CYP4F22Q6NT55 531 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 PLBD2Q8NHP8 589 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 DPF2Q92785 391 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 ABHD8Q96I13 439 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 SPEF2Q9C093 1822 aa11.05□□□□□ -0.64
APOBEC3F-204ENST00000491387 YDJCA8MPS7 323 aa11.04□□□□□ -0.64
APOBEC3F-204ENST00000491387 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
APOBEC3F-204ENST00000491387 CDC37L1Q7L3B6 337 aa11.04□□□□□ -0.64
APOBEC3F-204ENST00000491387 BEGAINQ9BUH8 593 aa11.04□□□□□ -0.64
APOBEC3F-204ENST00000491387 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
APOBEC3F-204ENST00000491387 RAD17O75943 681 aa11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 RUNDC1Q96C34 613 aa11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 BCL2L13Q9BXK5 485 aa11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 GLIS2Q9BZE0 524 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 CNOT7Q9UIV1 285 aaKnown RBP11.03□□□□□ -0.64
APOBEC3F-204ENST00000491387 H7C1D1 291 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 RPS12P25398 132 aaKnown RBP11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 RGS19P49795 217 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 KRT24Q2M2I5 525 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 HDGFL1Q5TGJ6 251 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 TRPM4Q8TD43 1214 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 MYBBP1AQ9BQG0 1328 aaKnown RBP11.02□□□□□ -0.65
APOBEC3F-204ENST00000491387 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 CELF1Q92879 486 aaKnown RBP11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 COL4A1P02462 1669 aa11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZNF609O15014 1411 aa11.01□□□□□ -0.65
APOBEC3F-204ENST00000491387 PSMD14O00487 310 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 AOC2O75106 756 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZNF853P0CG23 659 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 RPS8P62241 208 aaKnown RBP11□□□□□ -0.65
APOBEC3F-204ENST00000491387 NOGQ13253 232 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 CCDC184Q52MB2 194 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 MICALL2Q8IY33 904 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 FAM89AQ96GI7 184 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 POLLQ9UGP5 575 aa11□□□□□ -0.65
APOBEC3F-204ENST00000491387 POLR2AP24928 1970 aaKnown RBP10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 SHTN1A0MZ66 631 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 GPSM2P81274 684 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 DUSP27Q5VZP5 1158 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 EYA3Q99504 573 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 MYH3P11055 1940 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 RTL9Q8NET4 1388 aa10.99□□□□□ -0.65
APOBEC3F-204ENST00000491387 IRS4O14654 1257 aaPredicted RBP10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 VIL1P09327 827 aaKnown RBP10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 GRM1Q13255 1194 aa10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 NEUROD2Q15784 382 aa10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 USP48Q86UV5 1035 aa10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 TBC1D16Q8TBP0 767 aa10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 ADAMTS8Q9UP79 889 aa10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
APOBEC3F-204ENST00000491387 CASP8AP2Q9UKL3 1982 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 FAM155AB1AL88 458 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 ATP5J2-PTCD1G3V325 749 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 ECE2O60344 883 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 EGFRP00533 1210 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 HUNKP57058 714 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 SAMD7Q7Z3H4 446 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 KRT26Q7Z3Y9 468 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 DBNDD1Q9H9R9 158 aa10.97□□□□□ -0.65
APOBEC3F-204ENST00000491387 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms