RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ARSDP51689 593 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
PHC3-213ENST00000491258 MSL1Q68DK7 614 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 VTI1AQ96AJ9 217 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 ZFP64Q9NPA5 681 aa9.2□□□□□ -0.94
PHC3-213ENST00000491258 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
PHC3-213ENST00000491258 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
PHC3-213ENST00000491258 ARTNQ5T4W7 220 aa9.19□□□□□ -0.94
PHC3-213ENST00000491258 ELMSAN1Q6PJG2 1045 aa9.19□□□□□ -0.94
PHC3-213ENST00000491258 DHX32Q7L7V1 743 aaKnown RBP9.19□□□□□ -0.94
PHC3-213ENST00000491258 LPIN3Q9BQK8 851 aa9.19□□□□□ -0.94
PHC3-213ENST00000491258 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
PHC3-213ENST00000491258 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
PHC3-213ENST00000491258 RARAP10276 462 aa9.18□□□□□ -0.94
PHC3-213ENST00000491258 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
PHC3-213ENST00000491258 PERM1Q5SV97 790 aa9.18□□□□□ -0.94
PHC3-213ENST00000491258 QTRT2Q9H974 415 aaKnown RBP9.18□□□□□ -0.94
PHC3-213ENST00000491258 ZBTB42B2RXF5 422 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 SASH3O75995 380 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 MICAL2O94851 1124 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 PLAURQ03405 335 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 WFDC8Q8IUA0 241 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 FRRS1LQ9P0K9 344 aa9.17□□□□□ -0.94
PHC3-213ENST00000491258 FOXO3O43524 673 aa9.16□□□□□ -0.94
PHC3-213ENST00000491258 GRIK5Q16478 980 aa9.16□□□□□ -0.94
PHC3-213ENST00000491258 NBPF11Q86T75 865 aa9.16□□□□□ -0.94
PHC3-213ENST00000491258 KRTAP9-9Q9BYP9 154 aa9.16□□□□□ -0.94
PHC3-213ENST00000491258 KRTAP9-4Q9BYQ2 154 aa9.16□□□□□ -0.94
PHC3-213ENST00000491258 C11orf91Q3C1V1 193 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 HFE2Q6ZVN8 426 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 ILDR2Q71H61 639 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 FBXO11Q86XK2 927 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 DTWD1Q8N5C7 304 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 TRPM4Q8TD43 1214 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 USP20Q9Y2K6 914 aa9.15□□□□□ -0.94
PHC3-213ENST00000491258 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
PHC3-213ENST00000491258 WEE1P30291 646 aa9.14□□□□□ -0.95
PHC3-213ENST00000491258 GPLD1P80108 840 aa9.14□□□□□ -0.95
PHC3-213ENST00000491258 WFDC12Q8WWY7 111 aa9.14□□□□□ -0.95
PHC3-213ENST00000491258 ARXQ96QS3 562 aa9.14□□□□□ -0.95
PHC3-213ENST00000491258 SMG9Q9H0W8 520 aaKnown RBP9.14□□□□□ -0.95
PHC3-213ENST00000491258 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
PHC3-213ENST00000491258 IREB2P48200 963 aaKnown RBP9.13□□□□□ -0.95
PHC3-213ENST00000491258 SSBP4Q9BWG4 385 aaPredicted RBP9.13□□□□□ -0.95
PHC3-213ENST00000491258 LRP8Q14114 963 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 KRTAP19-1Q8IUB9 90 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 FAM200AQ8TCP9 573 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 TTC9Q92623 222 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 MYO19Q96H55 970 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 C11orf16Q9NQ32 467 aa9.12□□□□□ -0.95
PHC3-213ENST00000491258 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.95
PHC3-213ENST00000491258 RTCBQ9Y3I0 505 aaKnown RBP9.12□□□□□ -0.95
PHC3-213ENST00000491258 A6NJR5 290 aa9.11□□□□□ -0.95
PHC3-213ENST00000491258 NOS3P29474 1203 aa9.11□□□□□ -0.95
PHC3-213ENST00000491258 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
PHC3-213ENST00000491258 CMTR1Q8N1G2 835 aaKnown RBP9.11□□□□□ -0.95
PHC3-213ENST00000491258 OPLAHO14841 1288 aa9.1□□□□□ -0.95
PHC3-213ENST00000491258 NRLP54845 237 aa9.1□□□□□ -0.95
PHC3-213ENST00000491258 CDCA8Q53HL2 280 aa9.1□□□□□ -0.95
PHC3-213ENST00000491258 IGF2-ASQ6U949 168 aa9.1□□□□□ -0.95
PHC3-213ENST00000491258 LRFN2Q9ULH4 789 aa9.1□□□□□ -0.95
PHC3-213ENST00000491258 XYLBO75191 536 aa9.09□□□□□ -0.95
PHC3-213ENST00000491258 RFX1P22670 979 aa9.09□□□□□ -0.95
PHC3-213ENST00000491258 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
PHC3-213ENST00000491258 TLR7Q9NYK1 1049 aaKnown RBP9.09□□□□□ -0.95
PHC3-213ENST00000491258 J3QW42 95 aa9.08□□□□□ -0.96
PHC3-213ENST00000491258 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
PHC3-213ENST00000491258 DEAF1O75398 565 aaPredicted RBP9.08□□□□□ -0.96
PHC3-213ENST00000491258 PSAPP07602 524 aa9.08□□□□□ -0.96
PHC3-213ENST00000491258 TMEM132AQ24JP5 1023 aa9.08□□□□□ -0.96
PHC3-213ENST00000491258 PLD4Q96BZ4 506 aa9.08□□□□□ -0.96
PHC3-213ENST00000491258 MEGF10Q96KG7 1140 aa9.08□□□□□ -0.96
PHC3-213ENST00000491258 GHRHP01286 108 aa9.07□□□□□ -0.96
PHC3-213ENST00000491258 CFAP70Q5T0N1 1121 aa9.07□□□□□ -0.96
PHC3-213ENST00000491258 GDF6Q6KF10 455 aaPredicted RBP9.07□□□□□ -0.96
PHC3-213ENST00000491258 NSUN5Q96P11 429 aaKnown RBP9.07□□□□□ -0.96
PHC3-213ENST00000491258 LOC102724428A0A0B4J2F2 783 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 KRTAP4-8A0A0G2JLE6 195 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 BTBD11A6QL63 1104 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 EGFRP00533 1210 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 SIK1P57059 783 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
PHC3-213ENST00000491258 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
PHC3-213ENST00000491258 MMP20O60882 483 aa9.05□□□□□ -0.96
PHC3-213ENST00000491258 COX20Q5RI15 118 aa9.05□□□□□ -0.96
PHC3-213ENST00000491258 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
PHC3-213ENST00000491258 NOVA2Q9UNW9 492 aaKnown RBP9.05□□□□□ -0.96
PHC3-213ENST00000491258 DLL1O00548 723 aa9.04□□□□□ -0.96
PHC3-213ENST00000491258 IL22RA1Q8N6P7 574 aa9.04□□□□□ -0.96
PHC3-213ENST00000491258 AKTIPQ9H8T0 292 aa9.04□□□□□ -0.96
PHC3-213ENST00000491258 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
PHC3-213ENST00000491258 KCNMB2Q9Y691 235 aa9.04□□□□□ -0.96
PHC3-213ENST00000491258 ALX3O95076 343 aa9.03□□□□□ -0.96
PHC3-213ENST00000491258 PRR23CQ6ZRP0 262 aa9.03□□□□□ -0.96
PHC3-213ENST00000491258 PRMT3O60678 531 aa9.02□□□□□ -0.97
PHC3-213ENST00000491258 MRPL18Q9H0U6 180 aaKnown RBP9.02□□□□□ -0.97
PHC3-213ENST00000491258 ETFBKMTQ8IXQ9 262 aa9.01□□□□□ -0.97
PHC3-213ENST00000491258 RNF112Q9ULX5 631 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms