RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CSF1RP07333 972 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
SMPD4-219ENST00000491128 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
SMPD4-219ENST00000491128 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
SMPD4-219ENST00000491128 NTSR2O95665 410 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 NUP98P52948 1817 aa17.05■□□□□ 0.32
SMPD4-219ENST00000491128 EYA2O00167 538 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 PDE8AO60658 829 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 RFC4P35249 363 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 RC3H1Q5TC82 1133 aaKnown RBP17.04■□□□□ 0.32
SMPD4-219ENST00000491128 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 IL25Q9H293 177 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 SNAP23O00161 211 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 TRAPPC3LQ5T215 181 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
SMPD4-219ENST00000491128 FBXO41Q8TF61 875 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 SBF2Q86WG5 1849 aa17.04■□□□□ 0.32
SMPD4-219ENST00000491128 CDHR2Q9BYE9 1310 aa17.03■□□□□ 0.32
SMPD4-219ENST00000491128 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-219ENST00000491128 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
SMPD4-219ENST00000491128 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-219ENST00000491128 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
SMPD4-219ENST00000491128 CHGBP05060 677 aa17.02■□□□□ 0.31
SMPD4-219ENST00000491128 PARP10Q53GL7 1025 aa17.01■□□□□ 0.31
SMPD4-219ENST00000491128 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
SMPD4-219ENST00000491128 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
SMPD4-219ENST00000491128 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
SMPD4-219ENST00000491128 CLEC4GQ6UXB4 293 aa17.01■□□□□ 0.31
SMPD4-219ENST00000491128 SETDB2Q96T68 719 aa17.01■□□□□ 0.31
SMPD4-219ENST00000491128 CHMLP26374 656 aa17■□□□□ 0.31
SMPD4-219ENST00000491128 ADORA1P30542 326 aa17■□□□□ 0.31
SMPD4-219ENST00000491128 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
SMPD4-219ENST00000491128 NBPF5PQ86XG9 351 aaPredicted RBP17■□□□□ 0.31
SMPD4-219ENST00000491128 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
SMPD4-219ENST00000491128 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 NPHP1O15259 732 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 CEP126Q9P2H0 1117 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 TAF5LO75529 589 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 ZNF827Q17R98 1081 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 METTL24Q5JXM2 366 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 TTC41PQ6P2S7 1318 aa16.99■□□□□ 0.31
SMPD4-219ENST00000491128 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
SMPD4-219ENST00000491128 WTIPA6NIX2 430 aaPredicted RBP16.98■□□□□ 0.31
SMPD4-219ENST00000491128 ERC2O15083 957 aa16.98■□□□□ 0.31
SMPD4-219ENST00000491128 CWC27Q6UX04 472 aaKnown RBP16.98■□□□□ 0.31
SMPD4-219ENST00000491128 RREB1Q92766 1687 aa16.98■□□□□ 0.31
SMPD4-219ENST00000491128 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
SMPD4-219ENST00000491128 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 TFCP2L1Q9NZI6 479 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 RIPOR2Q9Y4F9 1068 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 NFIXQ14938 502 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 AOX1Q06278 1338 aa16.97■□□□□ 0.31
SMPD4-219ENST00000491128 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
SMPD4-219ENST00000491128 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
SMPD4-219ENST00000491128 C4BP0C0L5 1744 aa16.96■□□□□ 0.31
SMPD4-219ENST00000491128 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
SMPD4-219ENST00000491128 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
SMPD4-219ENST00000491128 ANO2Q9NQ90 1003 aa16.96■□□□□ 0.31
SMPD4-219ENST00000491128 ANKRD36CQ5JPF3 1778 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 CIAO1O76071 339 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 PI16Q6UXB8 463 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 LY75O60449 1722 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 GYS1P13807 737 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 MPHOSPH8Q99549 860 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
SMPD4-219ENST00000491128 CICQ96RK0 1608 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-219ENST00000491128 EN1Q05925 392 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-219ENST00000491128 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
SMPD4-219ENST00000491128 XAGE2Q96GT9 111 aa16.94■□□□□ 0.3
SMPD4-219ENST00000491128 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
SMPD4-219ENST00000491128 COL4A1P02462 1669 aa16.94■□□□□ 0.3
SMPD4-219ENST00000491128 KIF2CQ99661 725 aa16.94■□□□□ 0.3
SMPD4-219ENST00000491128 SCARF1Q14162 830 aa16.93■□□□□ 0.3
SMPD4-219ENST00000491128 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
SMPD4-219ENST00000491128 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
SMPD4-219ENST00000491128 SRCAPQ6ZRS2 3230 aa16.93■□□□□ 0.3
SMPD4-219ENST00000491128 TPTE2Q6XPS3 522 aa16.93■□□□□ 0.3
SMPD4-219ENST00000491128 ANTXR1Q9H6X2 564 aa16.93■□□□□ 0.3
SMPD4-219ENST00000491128 GOLIM4O00461 696 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMPD4-219ENST00000491128 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
SMPD4-219ENST00000491128 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 RIC1Q4ADV7 1423 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 UTRNP46939 3433 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 TAF1LQ8IZX4 1826 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 ATP5JP18859 108 aa16.92■□□□□ 0.3
SMPD4-219ENST00000491128 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms