RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 WDR63Q8IWG1 891 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
CLDN1-202ENST00000490800 NBPF15Q8N660 670 aa9.79□□□□□ -0.84
CLDN1-202ENST00000490800 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLDN1-202ENST00000490800 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLDN1-202ENST00000490800 THUMPD2Q9BTF0 503 aaKnown RBP9.79□□□□□ -0.84
CLDN1-202ENST00000490800 NPHP1O15259 732 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 TOMM70O94826 608 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 NUDT7P0C024 238 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 HSPA6P17066 643 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 PDE6BP35913 854 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 PRELPP51888 382 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 RASSF7Q02833 373 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 ARSIQ5FYB1 569 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 EPAS1Q99814 870 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 PCDHGA10Q9Y5H3 936 aa9.78□□□□□ -0.84
CLDN1-202ENST00000490800 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
CLDN1-202ENST00000490800 E9PSI1 815 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 C21orf2O43822 256 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 HIC1Q14526 733 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 CLEC4GQ6UXB4 293 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 CNBD1Q8NA66 436 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 RRAGCQ9HB90 399 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 PDZRN3Q9UPQ7 1066 aa9.77□□□□□ -0.85
CLDN1-202ENST00000490800 FAM177BA6PVY3 158 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 LMNB1P20700 586 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 EIF4A1P60842 406 aaKnown RBP9.76□□□□□ -0.85
CLDN1-202ENST00000490800 ST5P78524 1137 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 HLFQ16534 295 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 NBPF5PQ86XG9 351 aaPredicted RBP9.76□□□□□ -0.85
CLDN1-202ENST00000490800 AFDNP55196 1824 aaKnown RBP9.76□□□□□ -0.85
CLDN1-202ENST00000490800 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
CLDN1-202ENST00000490800 KDM2BQ8NHM5 1336 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 DLG5Q8TDM6 1919 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 CEP350Q5VT06 3117 aa9.76□□□□□ -0.85
CLDN1-202ENST00000490800 NFKBIEO00221 500 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 SRGNP10124 158 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 FECHP22830 423 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 PTGDRQ13258 359 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 TSR1Q2NL82 804 aaKnown RBP9.75□□□□□ -0.85
CLDN1-202ENST00000490800 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 C16orf71Q8IYS4 520 aaPredicted RBP9.75□□□□□ -0.85
CLDN1-202ENST00000490800 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 NIP7Q9Y221 180 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLDN1-202ENST00000490800 ZNF652Q9Y2D9 606 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 SUPT16HQ9Y5B9 1047 aaKnown RBP9.75□□□□□ -0.85
CLDN1-202ENST00000490800 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 NRXN2Q9P2S2 1712 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 IL16Q14005 1332 aa9.75□□□□□ -0.85
CLDN1-202ENST00000490800 TRIM66O15016 1216 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 MYL6BP14649 208 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 LMOD3Q0VAK6 560 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 TMEM132AQ24JP5 1023 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 STYK1Q6J9G0 422 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 CNKSR1Q969H4 720 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 MASTLQ96GX5 879 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 ARFGEF1Q9Y6D6 1849 aa9.74□□□□□ -0.85
CLDN1-202ENST00000490800 GLTPD2A6NH11 291 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 FOSBP53539 338 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 TTLL7Q6ZT98 887 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 RBM46Q8TBY0 533 aaKnown RBP9.73□□□□□ -0.85
CLDN1-202ENST00000490800 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 ZSWIM6Q9HCJ5 1215 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 RCAN3Q9UKA8 241 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 RNF123Q5XPI4 1314 aa9.73□□□□□ -0.85
CLDN1-202ENST00000490800 KLRG2A4D1S0 409 aaPredicted RBP9.72□□□□□ -0.85
CLDN1-202ENST00000490800 ERVV-1B6SEH8 477 aa9.72□□□□□ -0.85
CLDN1-202ENST00000490800 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CLDN1-202ENST00000490800 APLP1P51693 650 aa9.72□□□□□ -0.85
CLDN1-202ENST00000490800 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
CLDN1-202ENST00000490800 PRPF40BQ6NWY9 871 aaKnown RBP9.72□□□□□ -0.85
CLDN1-202ENST00000490800 MYH16Q9H6N6 1097 aa9.72□□□□□ -0.85
CLDN1-202ENST00000490800 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
CLDN1-202ENST00000490800 IRF6O14896 467 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 ZNF853P0CG23 659 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 VEGFAP15692 232 aaPredicted RBP9.71□□□□□ -0.86
CLDN1-202ENST00000490800 NPR1P16066 1061 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.86
CLDN1-202ENST00000490800 CALD1Q05682 793 aaKnown RBP9.71□□□□□ -0.86
CLDN1-202ENST00000490800 GPR153Q6NV75 609 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 KIF6Q6ZMV9 814 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 C7orf43Q8WVR3 580 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 ZBTB3Q9H5J0 574 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 MAP3K15Q6ZN16 1313 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 SCN7AQ01118 1682 aa9.71□□□□□ -0.86
CLDN1-202ENST00000490800 POTECB2RU33 542 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 GPTP24298 496 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 HTRA3P83110 453 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 PDE4DQ08499 809 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 FSTL1Q12841 308 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 OLFM4Q6UX06 510 aa9.7□□□□□ -0.86
CLDN1-202ENST00000490800 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms