RNA–Protein interactions for RNA: ENST00000490673.5

OPN3-206, Transcript of opsin 3, humanhuman

TSL 1 (best)

Gene OPN3, Length 1,816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3-206ENST00000490673 BBOX1O75936 387 aa29.24■■■□□ 2.27
OPN3-206ENST00000490673 CTSWP56202 376 aa29.24■■■□□ 2.27
OPN3-206ENST00000490673 FRAT1Q92837 279 aaPredicted RBP29.24■■■□□ 2.27
OPN3-206ENST00000490673 C9orf78Q9NZ63 289 aaPredicted RBP29.24■■■□□ 2.27
OPN3-206ENST00000490673 CHD4Q14839 1912 aa29.24■■■□□ 2.27
OPN3-206ENST00000490673 PRELPP51888 382 aa29.24■■■□□ 2.27
OPN3-206ENST00000490673 CELF1Q92879 486 aaKnown RBP29.24■■■□□ 2.27
OPN3-206ENST00000490673 SEC31BQ9NQW1 1179 aa29.24■■■□□ 2.27
OPN3-206ENST00000490673 PPEF1O14829 653 aaPredicted RBP29.23■■■□□ 2.27
OPN3-206ENST00000490673 NBPF7P0C2Y1 421 aaPredicted RBP29.23■■■□□ 2.27
OPN3-206ENST00000490673 RASSF7Q02833 373 aa29.23■■■□□ 2.27
OPN3-206ENST00000490673 CCDC152Q4G0S7 254 aa29.23■■■□□ 2.27
OPN3-206ENST00000490673 SOGA3Q5TF21 947 aa29.23■■■□□ 2.27
OPN3-206ENST00000490673 IPO8O15397 1037 aaKnown RBP29.22■■■□□ 2.27
OPN3-206ENST00000490673 TRIM27P14373 513 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 YY1P25490 414 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 TAF1P21675 1872 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 CCDC93Q567U6 631 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 ATF7IPQ6VMQ6 1270 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 USP44Q9H0E7 712 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 TNNQ9UQP3 1299 aa29.22■■■□□ 2.27
OPN3-206ENST00000490673 UTYO14607 1347 aa29.21■■■□□ 2.27
OPN3-206ENST00000490673 CSF1RP07333 972 aa29.21■■■□□ 2.27
OPN3-206ENST00000490673 ATP6V0A2Q9Y487 856 aa29.21■■■□□ 2.27
OPN3-206ENST00000490673 CCT4P50991 539 aaKnown RBP29.2■■■□□ 2.26
OPN3-206ENST00000490673 FOXO4P98177 505 aa29.2■■■□□ 2.26
OPN3-206ENST00000490673 EPHA10Q5JZY3 1008 aa29.2■■■□□ 2.26
OPN3-206ENST00000490673 GREM2Q9H772 168 aa29.2■■■□□ 2.26
OPN3-206ENST00000490673 SNED1Q8TER0 1413 aa29.19■■■□□ 2.26
OPN3-206ENST00000490673 COL4A1P02462 1669 aa29.19■■■□□ 2.26
OPN3-206ENST00000490673 RPS8P62241 208 aaKnown RBP29.19■■■□□ 2.26
OPN3-206ENST00000490673 CC2D2BQ6DHV5 1058 aa29.19■■■□□ 2.26
OPN3-206ENST00000490673 RTKN2Q8IZC4 609 aa29.19■■■□□ 2.26
OPN3-206ENST00000490673 KAZALD1Q96I82 304 aa29.19■■■□□ 2.26
OPN3-206ENST00000490673 SP8Q8IXZ3 490 aa29.18■■■□□ 2.26
OPN3-206ENST00000490673 TAOK3Q9H2K8 898 aa29.18■■■□□ 2.26
OPN3-206ENST00000490673 C9orf131Q5VYM1 1079 aa29.17■■■□□ 2.26
OPN3-206ENST00000490673 LTBP3Q9NS15 1303 aa29.17■■■□□ 2.26
OPN3-206ENST00000490673 FER1L6Q2WGJ9 1857 aa29.17■■■□□ 2.26
OPN3-206ENST00000490673 ZKSCAN2Q63HK3 967 aa29.17■■■□□ 2.26
OPN3-206ENST00000490673 LMNB1P20700 586 aa29.16■■■□□ 2.26
OPN3-206ENST00000490673 INTS3Q68E01 1043 aaKnown RBP29.16■■■□□ 2.26
OPN3-206ENST00000490673 CLUAP1Q96AJ1 413 aa29.16■■■□□ 2.26
OPN3-206ENST00000490673 SUCLG2Q96I99 432 aa29.16■■■□□ 2.26
OPN3-206ENST00000490673 FKBP4Q02790 459 aaKnown RBP eCLIP29.15■■■□□ 2.26
OPN3-206ENST00000490673 TMC4Q7Z404 712 aa29.14■■■□□ 2.26
OPN3-206ENST00000490673 RNF181Q9P0P0 153 aa29.14■■■□□ 2.26
OPN3-206ENST00000490673 RCAN3Q9UKA8 241 aa29.14■■■□□ 2.26
OPN3-206ENST00000490673 RTL9Q8NET4 1388 aa29.14■■■□□ 2.26
OPN3-206ENST00000490673 SBF1O95248 1867 aa29.14■■■□□ 2.25
OPN3-206ENST00000490673 FAM161AQ3B820 660 aa29.13■■■□□ 2.25
OPN3-206ENST00000490673 LMBR1LQ6UX01 489 aa29.13■■■□□ 2.25
OPN3-206ENST00000490673 ITGA6P23229 1130 aa29.13■■■□□ 2.25
OPN3-206ENST00000490673 GRIPAP1Q4V328 841 aa29.13■■■□□ 2.25
OPN3-206ENST00000490673 PSMD1Q99460 953 aa29.13■■■□□ 2.25
OPN3-206ENST00000490673 MYH3P11055 1940 aa29.12■■■□□ 2.25
OPN3-206ENST00000490673 TMX4Q9H1E5 349 aaPredicted RBP29.12■■■□□ 2.25
OPN3-206ENST00000490673 ZNF277Q9NRM2 450 aaPredicted RBP29.11■■■□□ 2.25
OPN3-206ENST00000490673 ANKRD18AQ8IVF6 992 aa29.1■■■□□ 2.25
OPN3-206ENST00000490673 CDC5LQ99459 802 aaKnown RBP29.1■■■□□ 2.25
OPN3-206ENST00000490673 MPNDQ8N594 471 aa29.09■■■□□ 2.25
OPN3-206ENST00000490673 BICC1Q9H694 974 aaKnown RBP29.09■■■□□ 2.25
OPN3-206ENST00000490673 TMEM57Q8N5G2 664 aa29.08■■■□□ 2.25
OPN3-206ENST00000490673 RLBP1P12271 317 aa29.08■■■□□ 2.25
OPN3-206ENST00000490673 RABL6Q3YEC7 729 aaPredicted RBP29.08■■■□□ 2.25
OPN3-206ENST00000490673 MEIS3Q99687 375 aa29.08■■■□□ 2.25
OPN3-206ENST00000490673 RTFDC1Q9BY42 306 aaPredicted RBP29.08■■■□□ 2.25
OPN3-206ENST00000490673 BSDC1Q9NW68 430 aaPredicted RBP29.08■■■□□ 2.25
OPN3-206ENST00000490673 DPP8Q6V1X1 898 aaPredicted RBP29.07■■■□□ 2.24
OPN3-206ENST00000490673 ANKRD44Q8N8A2 993 aa29.07■■■□□ 2.24
OPN3-206ENST00000490673 NSFL1CQ9UNZ2 370 aaKnown RBP29.07■■■□□ 2.24
OPN3-206ENST00000490673 CHMP3Q9Y3E7 222 aa29.07■■■□□ 2.24
OPN3-206ENST00000490673 IFIT5Q13325 482 aaKnown RBP29.06■■■□□ 2.24
OPN3-206ENST00000490673 DZIP1LQ8IYY4 767 aaKnown RBP29.06■■■□□ 2.24
OPN3-206ENST00000490673 ANKRD18BA2A2Z9 1011 aa29.06■■■□□ 2.24
OPN3-206ENST00000490673 GPSM2P81274 684 aa29.06■■■□□ 2.24
OPN3-206ENST00000490673 ZNF784Q8NCA9 323 aaPredicted RBP29.06■■■□□ 2.24
OPN3-206ENST00000490673 CCDC88AQ3V6T2 1871 aa29.06■■■□□ 2.24
OPN3-206ENST00000490673 UBTFL1P0CB47 393 aaPredicted RBP29.04■■■□□ 2.24
OPN3-206ENST00000490673 IARSP41252 1262 aaKnown RBP29.04■■■□□ 2.24
OPN3-206ENST00000490673 IGHMBP2P38935 993 aaKnown RBP29.04■■■□□ 2.24
OPN3-206ENST00000490673 CCDC57Q2TAC2 916 aa29.04■■■□□ 2.24
OPN3-206ENST00000490673 MINPP1Q9UNW1 487 aa29.04■■■□□ 2.24
OPN3-206ENST00000490673 PLIN1O60240 522 aa29.03■■■□□ 2.24
OPN3-206ENST00000490673 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
OPN3-206ENST00000490673 POLLQ9UGP5 575 aa29.03■■■□□ 2.24
OPN3-206ENST00000490673 LRRC37AA6NMS7 1700 aa29.03■■■□□ 2.24
OPN3-206ENST00000490673 PODXL2Q9NZ53 605 aa29.02■■■□□ 2.24
OPN3-206ENST00000490673 ZNF594Q96JF6 807 aaPredicted RBP29.01■■■□□ 2.24
OPN3-206ENST00000490673 MPHOSPH8Q99549 860 aa29.01■■■□□ 2.24
OPN3-206ENST00000490673 SUPT20HQ8NEM7 779 aa29■■■□□ 2.23
OPN3-206ENST00000490673 PANK1Q8TE04 598 aa29■■■□□ 2.23
OPN3-206ENST00000490673 ANKIB1Q9P2G1 1089 aa29■■■□□ 2.23
OPN3-206ENST00000490673 LRRFIP2Q9Y608 721 aaKnown RBP29■■■□□ 2.23
OPN3-206ENST00000490673 ZC3H4Q9UPT8 1303 aaKnown RBP28.99■■■□□ 2.23
OPN3-206ENST00000490673 GNAI3P08754 354 aa28.99■■■□□ 2.23
OPN3-206ENST00000490673 TBC1D16Q8TBP0 767 aa28.99■■■□□ 2.23
OPN3-206ENST00000490673 AOC3Q16853 763 aa28.99■■■□□ 2.23
OPN3-206ENST00000490673 VPS33BQ9H267 617 aa28.99■■■□□ 2.23
OPN3-206ENST00000490673 DUOX1Q9NRD9 1551 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms