RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SYNE4Q8N205 404 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 TTLL11Q8NHH1 800 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
SNX12-205ENST00000490561 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
SNX12-205ENST00000490561 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
SNX12-205ENST00000490561 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
SNX12-205ENST00000490561 IFIT5Q13325 482 aaKnown RBP16.46■□□□□ 0.23
SNX12-205ENST00000490561 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
SNX12-205ENST00000490561 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
SNX12-205ENST00000490561 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
SNX12-205ENST00000490561 MYH3P11055 1940 aa16.46■□□□□ 0.23
SNX12-205ENST00000490561 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
SNX12-205ENST00000490561 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
SNX12-205ENST00000490561 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
SNX12-205ENST00000490561 COPRSQ9NQ92 184 aa16.45■□□□□ 0.22
SNX12-205ENST00000490561 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
SNX12-205ENST00000490561 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SNX12-205ENST00000490561 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
SNX12-205ENST00000490561 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
SNX12-205ENST00000490561 DCTPP1Q9H773 170 aa16.44■□□□□ 0.22
SNX12-205ENST00000490561 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 ITGA6P23229 1130 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 CRY2Q49AN0 593 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
SNX12-205ENST00000490561 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
SNX12-205ENST00000490561 GREM2Q9H772 168 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 NOP58Q9Y2X3 529 aaKnown RBP16.43■□□□□ 0.22
SNX12-205ENST00000490561 C10orf71Q711Q0 1435 aa16.43■□□□□ 0.22
SNX12-205ENST00000490561 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
SNX12-205ENST00000490561 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNX12-205ENST00000490561 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
SNX12-205ENST00000490561 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
SNX12-205ENST00000490561 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
SNX12-205ENST00000490561 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
SNX12-205ENST00000490561 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
SNX12-205ENST00000490561 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
SNX12-205ENST00000490561 SURF6O75683 361 aaKnown RBP16.41■□□□□ 0.22
SNX12-205ENST00000490561 CIAO1O76071 339 aa16.41■□□□□ 0.22
SNX12-205ENST00000490561 IGHDP01880 384 aa16.41■□□□□ 0.22
SNX12-205ENST00000490561 IGHMBP2P38935 993 aaKnown RBP16.41■□□□□ 0.22
SNX12-205ENST00000490561 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
SNX12-205ENST00000490561 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
SNX12-205ENST00000490561 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
SNX12-205ENST00000490561 NPR1P16066 1061 aa16.4■□□□□ 0.22
SNX12-205ENST00000490561 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
SNX12-205ENST00000490561 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
SNX12-205ENST00000490561 C3orf67Q6ZVT6 689 aa16.4■□□□□ 0.22
SNX12-205ENST00000490561 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
SNX12-205ENST00000490561 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
SNX12-205ENST00000490561 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
SNX12-205ENST00000490561 SGIP1Q9BQI5 828 aa16.4■□□□□ 0.22
SNX12-205ENST00000490561 H0YIN7 160 aa16.39■□□□□ 0.21
SNX12-205ENST00000490561 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
SNX12-205ENST00000490561 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
SNX12-205ENST00000490561 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.21
SNX12-205ENST00000490561 MPHOSPH8Q99549 860 aa16.39■□□□□ 0.21
SNX12-205ENST00000490561 LRP5O75197 1615 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 EYA2O00167 538 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 GRAPQ13588 217 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 GRAPLQ8TC17 118 aaPredicted RBP16.38■□□□□ 0.21
SNX12-205ENST00000490561 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
SNX12-205ENST00000490561 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 BBOX1O75936 387 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 SRGNP10124 158 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 PTGER2P43116 358 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 TGFB2P61812 414 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
SNX12-205ENST00000490561 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
SNX12-205ENST00000490561 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
SNX12-205ENST00000490561 CNKSR1Q969H4 720 aa16.36■□□□□ 0.21
SNX12-205ENST00000490561 SIL1Q9H173 461 aa16.36■□□□□ 0.21
SNX12-205ENST00000490561 BSDC1Q9NW68 430 aaPredicted RBP16.36■□□□□ 0.21
SNX12-205ENST00000490561 MROH5Q6ZUA9 1318 aa16.36■□□□□ 0.21
SNX12-205ENST00000490561 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
SNX12-205ENST00000490561 NUCB1Q02818 461 aa16.35■□□□□ 0.21
SNX12-205ENST00000490561 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
SNX12-205ENST00000490561 RHPN1Q8TCX5 695 aa16.35■□□□□ 0.21
SNX12-205ENST00000490561 ZNF594Q96JF6 807 aaPredicted RBP16.35■□□□□ 0.21
SNX12-205ENST00000490561 ANKRD45Q5TZF3 282 aa16.34■□□□□ 0.21
SNX12-205ENST00000490561 CELF1Q92879 486 aaKnown RBP16.34■□□□□ 0.21
SNX12-205ENST00000490561 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
SNX12-205ENST00000490561 GPR108Q9NPR9 543 aa16.34■□□□□ 0.21
SNX12-205ENST00000490561 CEP126Q9P2H0 1117 aa16.34■□□□□ 0.21
SNX12-205ENST00000490561 RIPOR2Q9Y4F9 1068 aa16.34■□□□□ 0.21
SNX12-205ENST00000490561 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
SNX12-205ENST00000490561 ATG9AQ7Z3C6 839 aa16.33■□□□□ 0.2
SNX12-205ENST00000490561 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
SNX12-205ENST00000490561 CLASRPQ8N2M8 674 aaKnown RBP16.33■□□□□ 0.2
SNX12-205ENST00000490561 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms