RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 LDHBP07195 334 aaKnown RBP7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 PCSK2P16519 638 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 RHOQP17081 205 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 HSH2DQ96JZ2 352 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 NEUROD4Q9HD90 331 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 BCS1LQ9Y276 419 aa7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 SUPT6HQ7KZ85 1726 aaKnown RBP7.74□□□□□ -1.17
SSX2IP-208ENST00000490476 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 ST8SIA5O15466 376 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 MICAL2O94851 1124 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 USP5P45974 858 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 FMR1Q06787 632 aaKnown RBP eCLIP7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 DSC3Q14574 896 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 ARSJQ5FYB0 599 aaPredicted RBP7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 NBPF10Q6P3W6 841 aaKnown RBP7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 ZNF280CQ8ND82 737 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 RNF217Q8TC41 542 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 NUDT16Q96DE0 195 aaKnown RBP7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 FAM129BQ96TA1 746 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 CAMSAP1Q5T5Y3 1602 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 CCDC88BA6NC98 1476 aa7.73□□□□□ -1.17
SSX2IP-208ENST00000490476 PTPRKQ15262 1439 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 A6NHS1 94 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 POTECB2RU33 542 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 AXIN1O15169 862 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 BMP1P13497 986 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 YY1P25490 414 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 XPCQ01831 940 aaPredicted RBP7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 TSNAXIP1Q2TAA8 658 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 LYSMD3Q7Z3D4 306 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 SUSD3Q96L08 255 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 FAM161BQ96MY7 647 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 SETDB2Q96T68 719 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 ZDHHC3Q9NYG2 299 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 USP20Q9Y2K6 914 aa7.72□□□□□ -1.17
SSX2IP-208ENST00000490476 PNMA6FA0A0J9YX94 578 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 SPATA31C2B4DYI2 1134 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 ATP2B2Q01814 1243 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 SCARF1Q14162 830 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 LRRC69Q6ZNQ3 347 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 GJD3Q8N144 294 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 DUSP9Q99956 384 aaKnown RBP7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 TIMMDC1Q9NPL8 285 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 CPS1P31327 1500 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 ARHGEF12Q9NZN5 1544 aa7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 TTBK1Q5TCY1 1321 aaPredicted RBP7.71□□□□□ -1.18
SSX2IP-208ENST00000490476 C3P01024 1663 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 TGFBR3LH3BV60 316 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 IGHA2P01877 340 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 IDH3AP50213 366 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 HIF1AQ16665 826 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 PIK3R5Q8WYR1 880 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 GGNBP2Q9H3C7 697 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 RNF19AQ9NV58 838 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 FAM13BQ9NYF5 915 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 PARP2Q9UGN5 583 aa7.7□□□□□ -1.18
SSX2IP-208ENST00000490476 UACAQ9BZF9 1416 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 RICTORQ6R327 1708 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 LRRC7Q96NW7 1537 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 OPLAHO14841 1288 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 PRPF40AO75400 957 aaKnown RBP7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 RAPGEF3O95398 923 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 TCF3P15923 654 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 ATP4AP20648 1035 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 MSX1P28360 303 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 CMTR1Q8N1G2 835 aaKnown RBP7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 C7orf43Q8WVR3 580 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 GPAMQ9HCL2 828 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 ANKIB1Q9P2G1 1089 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
SSX2IP-208ENST00000490476 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 CEBPAP49715 358 aaPredicted RBP7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 ORC1Q13415 861 aa7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 ALKBH8Q96BT7 664 aaKnown RBP7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 ZIC5Q96T25 663 aa7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 IGSF5Q9NSI5 407 aa7.68□□□□□ -1.18
SSX2IP-208ENST00000490476 RECKO95980 971 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 FGD1P98174 961 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 PSMD2Q13200 908 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 MLECQ14165 292 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 ENOX2Q16206 610 aaKnown RBP7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 CSRNP1Q96S65 589 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 RUBCNLQ9H714 662 aa7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 RNF17Q9BXT8 1623 aaKnown RBP7.67□□□□□ -1.18
SSX2IP-208ENST00000490476 A0A1B0GTH6 734 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 A0A1W2PNR3 127 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 VAMP1P23763 118 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 ARSDP51689 593 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 BTLAQ7Z6A9 289 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 GAS2L1Q99501 681 aaPredicted RBP7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 BACH2Q9BYV9 841 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 VTI1BQ9UEU0 232 aa7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 DMGDHQ9UI17 866 aaKnown RBP7.66□□□□□ -1.18
SSX2IP-208ENST00000490476 DACH1Q9UI36 760 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms