RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 C7orf43Q8WVR3 580 aa17.41■□□□□ 0.38
SFXN4-208ENST00000490417 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
SFXN4-208ENST00000490417 BBOX1O75936 387 aa17.4■□□□□ 0.38
SFXN4-208ENST00000490417 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
SFXN4-208ENST00000490417 CCDC191Q8NCU4 936 aa17.4■□□□□ 0.38
SFXN4-208ENST00000490417 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
SFXN4-208ENST00000490417 FANCIQ9NVI1 1328 aa17.4■□□□□ 0.38
SFXN4-208ENST00000490417 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
SFXN4-208ENST00000490417 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 KSR2Q6VAB6 950 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 ZNF579Q8NAF0 562 aaKnown RBP17.39■□□□□ 0.37
SFXN4-208ENST00000490417 KIF12Q96FN5 646 aa17.39■□□□□ 0.37
SFXN4-208ENST00000490417 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
SFXN4-208ENST00000490417 MAP3K13O43283 966 aa17.38■□□□□ 0.37
SFXN4-208ENST00000490417 TOMM70O94826 608 aa17.38■□□□□ 0.37
SFXN4-208ENST00000490417 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
SFXN4-208ENST00000490417 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
SFXN4-208ENST00000490417 PSMD1Q99460 953 aa17.38■□□□□ 0.37
SFXN4-208ENST00000490417 METTL22Q9BUU2 404 aaPredicted RBP17.38■□□□□ 0.37
SFXN4-208ENST00000490417 CWC25Q9NXE8 425 aaPredicted RBP17.38■□□□□ 0.37
SFXN4-208ENST00000490417 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
SFXN4-208ENST00000490417 MYD88Q99836 296 aa17.37■□□□□ 0.37
SFXN4-208ENST00000490417 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
SFXN4-208ENST00000490417 ARFGEF2Q9Y6D5 1785 aa17.36■□□□□ 0.37
SFXN4-208ENST00000490417 SUPT20HQ8NEM7 779 aa17.36■□□□□ 0.37
SFXN4-208ENST00000490417 FAM89AQ96GI7 184 aa17.36■□□□□ 0.37
SFXN4-208ENST00000490417 MAP3K2Q9Y2U5 619 aa17.36■□□□□ 0.37
SFXN4-208ENST00000490417 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 SBF1O95248 1867 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
SFXN4-208ENST00000490417 RIOK3O14730 519 aaKnown RBP17.35■□□□□ 0.37
SFXN4-208ENST00000490417 KIF3CO14782 793 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
SFXN4-208ENST00000490417 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
SFXN4-208ENST00000490417 SYNE4Q8N205 404 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 VPS33BQ9H267 617 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 PCDHB13Q9Y5F0 798 aa17.35■□□□□ 0.37
SFXN4-208ENST00000490417 E9PSI1 815 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 VAMP4O75379 141 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
SFXN4-208ENST00000490417 FKBP5Q13451 457 aaPredicted RBP17.34■□□□□ 0.37
SFXN4-208ENST00000490417 GRAPQ13588 217 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
SFXN4-208ENST00000490417 RRAGCQ9HB90 399 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 NMRK2Q9NPI5 230 aa17.34■□□□□ 0.37
SFXN4-208ENST00000490417 FER1L6Q2WGJ9 1857 aa17.33■□□□□ 0.37
SFXN4-208ENST00000490417 ABCC4O15439 1325 aa17.33■□□□□ 0.36
SFXN4-208ENST00000490417 PCCAP05165 728 aaPredicted RBP17.33■□□□□ 0.36
SFXN4-208ENST00000490417 FLIIQ13045 1269 aa17.33■□□□□ 0.36
SFXN4-208ENST00000490417 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
SFXN4-208ENST00000490417 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
SFXN4-208ENST00000490417 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
SFXN4-208ENST00000490417 PCDHB8Q9UN66 801 aa17.33■□□□□ 0.36
SFXN4-208ENST00000490417 IQCA1LA6NCM1 817 aa17.32■□□□□ 0.36
SFXN4-208ENST00000490417 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
SFXN4-208ENST00000490417 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
SFXN4-208ENST00000490417 CACNA1SQ13698 1873 aa17.32■□□□□ 0.36
SFXN4-208ENST00000490417 PDE8AO60658 829 aa17.31■□□□□ 0.36
SFXN4-208ENST00000490417 PRELPP51888 382 aa17.31■□□□□ 0.36
SFXN4-208ENST00000490417 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
SFXN4-208ENST00000490417 RTL5Q5HYW3 569 aaPredicted RBP17.31■□□□□ 0.36
SFXN4-208ENST00000490417 DPP8Q6V1X1 898 aaPredicted RBP17.31■□□□□ 0.36
SFXN4-208ENST00000490417 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
SFXN4-208ENST00000490417 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
SFXN4-208ENST00000490417 MPNDQ8N594 471 aa17.31■□□□□ 0.36
SFXN4-208ENST00000490417 TNRC6CQ9HCJ0 1690 aaKnown RBP17.31■□□□□ 0.36
SFXN4-208ENST00000490417 FSTL1Q12841 308 aa17.3■□□□□ 0.36
SFXN4-208ENST00000490417 DIEXFQ68CQ4 756 aaKnown RBP17.3■□□□□ 0.36
SFXN4-208ENST00000490417 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
SFXN4-208ENST00000490417 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
SFXN4-208ENST00000490417 OLFM4Q6UX06 510 aa17.29■□□□□ 0.36
SFXN4-208ENST00000490417 SMC1BQ8NDV3 1235 aa17.29■□□□□ 0.36
SFXN4-208ENST00000490417 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 CDHR2Q9BYE9 1310 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 CACNA1FO60840 1977 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 HSPA6P17066 643 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
SFXN4-208ENST00000490417 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
SFXN4-208ENST00000490417 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 LINS1Q8NG48 757 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 CCDC88AQ3V6T2 1871 aa17.28■□□□□ 0.36
SFXN4-208ENST00000490417 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
SFXN4-208ENST00000490417 FZD9O00144 591 aa17.27■□□□□ 0.36
SFXN4-208ENST00000490417 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
SFXN4-208ENST00000490417 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
SFXN4-208ENST00000490417 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
SFXN4-208ENST00000490417 DDNO94850 711 aaPredicted RBP17.26■□□□□ 0.35
SFXN4-208ENST00000490417 G2E3Q7L622 706 aa17.26■□□□□ 0.35
SFXN4-208ENST00000490417 GPC2Q8N158 579 aa17.26■□□□□ 0.35
SFXN4-208ENST00000490417 EYA3Q99504 573 aa17.26■□□□□ 0.35
SFXN4-208ENST00000490417 RTFDC1Q9BY42 306 aaPredicted RBP17.26■□□□□ 0.35
SFXN4-208ENST00000490417 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms