RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 LAMC2Q13753 1193 aa8.14□□□□□ -1.11
PRPF4B-207ENST00000490399 ALKBH2Q6NS38 261 aa8.14□□□□□ -1.11
PRPF4B-207ENST00000490399 KRT25Q7Z3Z0 450 aa8.14□□□□□ -1.11
PRPF4B-207ENST00000490399 PIK3R5Q8WYR1 880 aa8.14□□□□□ -1.11
PRPF4B-207ENST00000490399 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
PRPF4B-207ENST00000490399 SASH3O75995 380 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 PDGFAP04085 211 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 EPXP11678 715 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 EPB42P16452 691 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 SND1Q7KZF4 910 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 GSX2Q9BZM3 304 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 PRR12Q9ULL5 1215 aa8.13□□□□□ -1.11
PRPF4B-207ENST00000490399 XYLBO75191 536 aa8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 TARSP26639 723 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 PCBP4P57723 403 aaKnown RBP8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 BHMTQ93088 406 aa8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 MKL2Q9ULH7 1088 aa8.12□□□□□ -1.11
PRPF4B-207ENST00000490399 UBAP1LF5GYI3 381 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 ADH6P28332 368 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 CCINQ13939 588 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 FAM182BQ5T319 152 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 FCHSD1Q86WN1 690 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 BRPF3Q9ULD4 1205 aa8.11□□□□□ -1.11
PRPF4B-207ENST00000490399 NFKB1P19838 968 aa8.1□□□□□ -1.11
PRPF4B-207ENST00000490399 PLA2G4EQ3MJ16 856 aa8.1□□□□□ -1.11
PRPF4B-207ENST00000490399 ZFATQ9P243 1243 aa8.1□□□□□ -1.11
PRPF4B-207ENST00000490399 NDUFB5O43674 189 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 ITGB2P05107 769 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 ZNF468Q5VIY5 522 aaPredicted RBP8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 BTBD6Q96KE9 485 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
PRPF4B-207ENST00000490399 IGHA1P01876 353 aa8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 PCSK2P16519 638 aa8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 COL8A1P27658 744 aa8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 MAPK1P28482 360 aa8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 SUV39H2Q9H5I1 410 aa8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
PRPF4B-207ENST00000490399 EGFRP00533 1210 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 RARAP10276 462 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 DGKGP49619 791 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 TBC1D8BQ0IIM8 1120 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 SUZ12Q15022 739 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 LINC00114Q6XXX2 140 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 CHSY3Q70JA7 882 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 ZNF438Q7Z4V0 828 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 GJD3Q8N144 294 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 TMEM63CQ9P1W3 806 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 DCTN4Q9UJW0 460 aa8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 FNDC3AQ9Y2H6 1198 aaKnown RBP8.07□□□□□ -1.12
PRPF4B-207ENST00000490399 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
PRPF4B-207ENST00000490399 TTC16Q8NEE8 873 aa8.06□□□□□ -1.12
PRPF4B-207ENST00000490399 ELP3Q9H9T3 547 aa8.06□□□□□ -1.12
PRPF4B-207ENST00000490399 KRBA1A5PL33 1030 aa8.05□□□□□ -1.12
PRPF4B-207ENST00000490399 MSTNO14793 375 aa8.05□□□□□ -1.12
PRPF4B-207ENST00000490399 MMP20O60882 483 aa8.05□□□□□ -1.12
PRPF4B-207ENST00000490399 USP5P45974 858 aa8.05□□□□□ -1.12
PRPF4B-207ENST00000490399 SPOCK3Q9BQ16 436 aa8.05□□□□□ -1.12
PRPF4B-207ENST00000490399 GNB5O14775 395 aa8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 CYP2E1P05181 493 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 RPLP1P05386 114 aaKnown RBP8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 MLLT1Q03111 559 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 NEUROD1Q13562 356 aa8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 TMC7Q7Z402 723 aa8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 C11orf16Q9NQ32 467 aa8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 CNTN3Q9P232 1028 aa8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 FOXD3Q9UJU5 478 aaPredicted RBP8.04□□□□□ -1.12
PRPF4B-207ENST00000490399 GPR182O15218 404 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 PROCP04070 461 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 TMCO4Q5TGY1 634 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 FAM129BQ96TA1 746 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 RBCK1Q9BYM8 510 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 NIF3L1Q9GZT8 377 aa8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
PRPF4B-207ENST00000490399 SIN3BO75182 1162 aa8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 MAP3K6O95382 1288 aa8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 IGHA2P01877 340 aa8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 CCDC27Q2M243 656 aa8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 TTC39BQ5VTQ0 682 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 C1orf127Q8N9H9 656 aa8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 UBE2OQ9C0C9 1292 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 DNAJB12Q9NXW2 375 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 ABI2Q9NYB9 513 aaPredicted RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 TLR7Q9NYK1 1049 aaKnown RBP8.02□□□□□ -1.13
PRPF4B-207ENST00000490399 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
PRPF4B-207ENST00000490399 TNFRSF21O75509 655 aa8.01□□□□□ -1.13
PRPF4B-207ENST00000490399 PDE3BQ13370 1112 aa8.01□□□□□ -1.13
PRPF4B-207ENST00000490399 ORC1Q13415 861 aa8.01□□□□□ -1.13
PRPF4B-207ENST00000490399 XKR5Q6UX68 686 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms