RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 A0A0G2JS52 829 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 E2F8A0AVK6 867 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 GOLGA6CA6NDK9 693 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 GOLGA6BA6NDN3 693 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 ZPR1O75312 459 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 WDHD1O75717 1129 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 PDGFAP04085 211 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 INHAP05111 366 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 GOLGA6DP0CG33 693 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 U2AF1L5P0DN76 240 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 CNGA1P29973 690 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SOX5P35711 763 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SOX9P48436 509 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 MASP1P48740 699 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 MMP16P51512 607 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 GDF10P55107 478 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 U2AF1Q01081 240 aaKnown RBP eCLIP3.55□□□□□ -1.842e-6■■■□□ 16.2
EPB41-212ENST00000490308 POU5F1BQ06416 359 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 RASGRF1Q13972 1273 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 RASA3Q14644 834 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 TSGA10IPQ3SY00 556 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 CT47A1Q5JQC4 288 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 CAPN12Q6ZSI9 719 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SH3RF1Q7Z6J0 888 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 THAP3Q8WTV1 239 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 CHAC2Q8WUX2 184 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 PPM1EQ8WY54 764 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 PMEPA1Q969W9 287 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 ZNF669Q96BR6 464 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 THAP11Q96EK4 314 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SGSM3Q96HU1 749 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SLC4A9Q96Q91 983 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 CRBNQ96SW2 442 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 APBA2Q99767 749 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SENP7Q9BQF6 1050 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 OCSTAMPQ9BR26 566 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 NT5C1AQ9BXI3 368 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 CARD14Q9BXL6 1004 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 UNC93B1Q9H1C4 597 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 GOLGA6AQ9NYA3 693 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 SWAP70Q9UH65 585 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 TRAK1Q9UPV9 953 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 LAS1LQ9Y4W2 734 aaKnown RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 EID1Q9Y6B2 187 aa3.55□□□□□ -1.84
EPB41-212ENST00000490308 V9GY48 417 aaPredicted RBP3.55□□□□□ -1.84
EPB41-212ENST00000490308 ROBO2Q9HCK4 1378 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 POTECB2RU33 542 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 KLF4O43474 513 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 RGS20O76081 388 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 GNRH1P01148 92 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 IMPDH2P12268 514 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 GTF2E1P29083 439 aaPredicted RBP3.54□□□□□ -1.84
EPB41-212ENST00000490308 ZAP70P43403 619 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 FXNQ16595 210 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 RTN1Q16799 776 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 C8orf34Q49A92 452 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.54□□□□□ -1.84
EPB41-212ENST00000490308 ERFEQ4G0M1 354 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 PPP4R4Q6NUP7 873 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.54□□□□□ -1.84
EPB41-212ENST00000490308 CYP2U1Q7Z449 544 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 TRMT44Q8IYL2 757 aaKnown RBP3.54□□□□□ -1.84
EPB41-212ENST00000490308 PAF1Q8N7H5 531 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 SNX29Q8TEQ0 813 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 EDEM1Q92611 657 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 SPSB2Q99619 263 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 MTRQ99707 1265 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 PRR12Q9ULL5 1215 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 PPM1HQ9ULR3 514 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 EFR3BQ9Y2G0 817 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 ATP8A1Q9Y2Q0 1164 aa3.54□□□□□ -1.84
EPB41-212ENST00000490308 SUPT16HQ9Y5B9 1047 aaKnown RBP3.54□□□□□ -1.84
EPB41-212ENST00000490308 A6NJY4 79 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 LCE2BO14633 110 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 TNFRSF10BO14763 440 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 NPHP1O15259 732 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 PDPK1O15530 556 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 USP17L7P0C7H9 530 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 HCLS1P14317 486 aaPredicted RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 MAN1A1P33908 653 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 EIF4A3P38919 411 aaKnown RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 HIRAP54198 1017 aaPredicted RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 WNT7BP56706 349 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 C2orf27AQ580R0 203 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 NBPF10Q6P3W6 841 aaKnown RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 TNS4Q8IZW8 715 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 ZSWIM2Q8NEG5 633 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 STAG1Q8WVM7 1258 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 ZNF516Q92618 1163 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 PURBQ96QR8 312 aaKnown RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 SAP130Q9H0E3 1048 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 TSPAN10Q9H1Z9 355 aaPredicted RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 CAAP1Q9H8G2 361 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 GNL3LQ9NVN8 582 aaKnown RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 SCHIP1Q9P0W5 487 aaPredicted RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 TTF2Q9UNY4 1162 aaKnown RBP3.53□□□□□ -1.84
EPB41-212ENST00000490308 MSRB2Q9Y3D2 182 aa3.53□□□□□ -1.84
EPB41-212ENST00000490308 SERTM1A2A2V5 107 aa3.52□□□□□ -1.85
EPB41-212ENST00000490308 TMEM229AB2RXF0 380 aa3.52□□□□□ -1.85
EPB41-212ENST00000490308 IFRD1O00458 451 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms