RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 ZBTB7BO15156 539 aaPredicted RBP18.45■□□□□ 0.54
TSC1-206ENST00000490179 NPR1P16066 1061 aa18.45■□□□□ 0.54
TSC1-206ENST00000490179 SF3B3Q15393 1217 aaKnown RBP18.45■□□□□ 0.54
TSC1-206ENST00000490179 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
TSC1-206ENST00000490179 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
TSC1-206ENST00000490179 GNAI2P04899 355 aa18.44■□□□□ 0.54
TSC1-206ENST00000490179 FOXO4P98177 505 aa18.44■□□□□ 0.54
TSC1-206ENST00000490179 STYK1Q6J9G0 422 aa18.44■□□□□ 0.54
TSC1-206ENST00000490179 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
TSC1-206ENST00000490179 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
TSC1-206ENST00000490179 CCDC85AQ96PX6 553 aaPredicted RBP18.44■□□□□ 0.54
TSC1-206ENST00000490179 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
TSC1-206ENST00000490179 EPHA10Q5JZY3 1008 aa18.43■□□□□ 0.54
TSC1-206ENST00000490179 LMBR1LQ6UX01 489 aa18.43■□□□□ 0.54
TSC1-206ENST00000490179 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
TSC1-206ENST00000490179 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
TSC1-206ENST00000490179 LRRFIP2Q9Y608 721 aaKnown RBP18.43■□□□□ 0.54
TSC1-206ENST00000490179 CSF1RP07333 972 aa18.42■□□□□ 0.54
TSC1-206ENST00000490179 KCNA3P22001 575 aa18.42■□□□□ 0.54
TSC1-206ENST00000490179 ALDH1B1P30837 517 aa18.42■□□□□ 0.54
TSC1-206ENST00000490179 HOXA10P31260 410 aaPredicted RBP18.42■□□□□ 0.54
TSC1-206ENST00000490179 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
TSC1-206ENST00000490179 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
TSC1-206ENST00000490179 SRCAPQ6ZRS2 3230 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 TTLL6Q8N841 843 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 CRAMP1Q96RY5 1269 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 GREM2Q9H772 168 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 CACNA1SQ13698 1873 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 RTL9Q8NET4 1388 aa18.41■□□□□ 0.54
TSC1-206ENST00000490179 BRCA1P38398 1863 aaKnown RBP18.4■□□□□ 0.54
TSC1-206ENST00000490179 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
TSC1-206ENST00000490179 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
TSC1-206ENST00000490179 ANKRD44Q8N8A2 993 aa18.4■□□□□ 0.54
TSC1-206ENST00000490179 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
TSC1-206ENST00000490179 GRAPQ13588 217 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 CCDC57Q2TAC2 916 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.53
TSC1-206ENST00000490179 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
TSC1-206ENST00000490179 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.53
TSC1-206ENST00000490179 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 SEC31BQ9NQW1 1179 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 ZBTB40Q9NUA8 1239 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 WWC3Q9ULE0 1092 aa18.39■□□□□ 0.53
TSC1-206ENST00000490179 ITGA6P23229 1130 aa18.38■□□□□ 0.53
TSC1-206ENST00000490179 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
TSC1-206ENST00000490179 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
TSC1-206ENST00000490179 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
TSC1-206ENST00000490179 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
TSC1-206ENST00000490179 BCS1LQ9Y276 419 aa18.37■□□□□ 0.53
TSC1-206ENST00000490179 TAF1P21675 1872 aa18.37■□□□□ 0.53
TSC1-206ENST00000490179 PPEF1O14829 653 aaPredicted RBP18.36■□□□□ 0.53
TSC1-206ENST00000490179 BBOX1O75936 387 aa18.36■□□□□ 0.53
TSC1-206ENST00000490179 IGHMBP2P38935 993 aaKnown RBP18.36■□□□□ 0.53
TSC1-206ENST00000490179 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
TSC1-206ENST00000490179 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
TSC1-206ENST00000490179 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
TSC1-206ENST00000490179 SLX4Q8IY92 1834 aa18.35■□□□□ 0.53
TSC1-206ENST00000490179 TMC4Q7Z404 712 aa18.35■□□□□ 0.53
TSC1-206ENST00000490179 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
TSC1-206ENST00000490179 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
TSC1-206ENST00000490179 SRGAP3O43295 1099 aa18.34■□□□□ 0.53
TSC1-206ENST00000490179 MTX1Q13505 466 aa18.34■□□□□ 0.53
TSC1-206ENST00000490179 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
TSC1-206ENST00000490179 MPHOSPH8Q99549 860 aa18.34■□□□□ 0.53
TSC1-206ENST00000490179 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
TSC1-206ENST00000490179 ARFGEF1Q9Y6D6 1849 aa18.33■□□□□ 0.53
TSC1-206ENST00000490179 C21orf2O43822 256 aa18.33■□□□□ 0.52
TSC1-206ENST00000490179 ATP8B2P98198 1209 aa18.33■□□□□ 0.52
TSC1-206ENST00000490179 AAMPQ13685 434 aa18.33■□□□□ 0.52
TSC1-206ENST00000490179 CEP85Q6P2H3 762 aa18.33■□□□□ 0.52
TSC1-206ENST00000490179 COL4A1P02462 1669 aa18.33■□□□□ 0.52
TSC1-206ENST00000490179 GPR162Q16538 588 aa18.32■□□□□ 0.52
TSC1-206ENST00000490179 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
TSC1-206ENST00000490179 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
TSC1-206ENST00000490179 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
TSC1-206ENST00000490179 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
TSC1-206ENST00000490179 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 NEFLP07196 543 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 LDHAL6AQ6ZMR3 332 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 CNNM1Q9NRU3 951 aa18.31■□□□□ 0.52
TSC1-206ENST00000490179 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
TSC1-206ENST00000490179 HMMRO75330 724 aa18.3■□□□□ 0.52
TSC1-206ENST00000490179 RFX5P48382 616 aaPredicted RBP18.3■□□□□ 0.52
TSC1-206ENST00000490179 CCDC93Q567U6 631 aa18.3■□□□□ 0.52
TSC1-206ENST00000490179 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
TSC1-206ENST00000490179 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
TSC1-206ENST00000490179 PTPN12Q05209 780 aaKnown RBP18.29■□□□□ 0.52
TSC1-206ENST00000490179 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
TSC1-206ENST00000490179 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
TSC1-206ENST00000490179 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
TSC1-206ENST00000490179 YBX3P16989 372 aaKnown RBP eCLIP18.28■□□□□ 0.524e-9■■■□□ 15.8
TSC1-206ENST00000490179 POLA2Q14181 598 aa18.28■□□□□ 0.52
TSC1-206ENST00000490179 GRIPAP1Q4V328 841 aa18.28■□□□□ 0.52
TSC1-206ENST00000490179 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
TSC1-206ENST00000490179 SIL1Q9H173 461 aa18.28■□□□□ 0.52
TSC1-206ENST00000490179 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms