RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 RNF20Q5VTR2 975 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 ZDHHC9Q9Y397 364 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 KCNJ4P48050 445 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 DDB1Q16531 1140 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 CREB3L3Q68CJ9 461 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 ISY1Q9ULR0 285 aaKnown RBP19.32■□□□□ 0.68
SNX5-214ENST00000490175 SPEF2Q9C093 1822 aa19.32■□□□□ 0.68
SNX5-214ENST00000490175 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 ERVV-1B6SEH8 477 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 CSF1RP07333 972 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
SNX5-214ENST00000490175 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
SNX5-214ENST00000490175 AK2P54819 239 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 NOL8Q76FK4 1167 aaKnown RBP19.31■□□□□ 0.68
SNX5-214ENST00000490175 SYTL4Q96C24 671 aaPredicted RBP19.31■□□□□ 0.68
SNX5-214ENST00000490175 HMG20BQ9P0W2 317 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 CYP46A1Q9Y6A2 500 aa19.31■□□□□ 0.68
SNX5-214ENST00000490175 FSD2A1L4K1 749 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 ADAMTS2O95450 1211 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 PSMA5P28066 241 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 JAKMIP1Q96N16 626 aaKnown RBP19.3■□□□□ 0.68
SNX5-214ENST00000490175 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
SNX5-214ENST00000490175 PALLDQ8WX93 1383 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 BRD1O95696 1058 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 LRRC24Q50LG9 513 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNX5-214ENST00000490175 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
SNX5-214ENST00000490175 ANO8Q9HCE9 1232 aaPredicted RBP19.3■□□□□ 0.68
SNX5-214ENST00000490175 RPAP1Q9BWH6 1393 aaPredicted RBP19.3■□□□□ 0.68
SNX5-214ENST00000490175 GOLGA6L3A6NEY3 463 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 RUFY3Q7L099 469 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 NLRP10Q86W26 655 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 ZNF594Q96JF6 807 aaPredicted RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 ZSCAN31Q96LW9 406 aaPredicted RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 DNAJC2Q99543 621 aaKnown RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 AKAP2Q9Y2D5 859 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 NUP98P52948 1817 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 CICQ96RK0 1608 aaPredicted RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 SLC27A2O14975 620 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 KLHL40Q2TBA0 621 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 TSGA10IPQ3SY00 556 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 EDC3Q96F86 508 aaKnown RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 FAM89AQ96GI7 184 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 PDRG1Q9NUG6 133 aa19.29■□□□□ 0.68
SNX5-214ENST00000490175 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.29■□□□□ 0.68
SNX5-214ENST00000490175 TAF5LO75529 589 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 HLFQ16534 295 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 ADCK5Q3MIX3 580 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 USPL1Q5W0Q7 1092 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 MCTP1Q6DN14 999 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 ARXQ96QS3 562 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 SH2B1Q9NRF2 756 aaPredicted RBP19.28■□□□□ 0.68
SNX5-214ENST00000490175 MYH3P11055 1940 aa19.28■□□□□ 0.68
SNX5-214ENST00000490175 A0A1B0GUL7 405 aa19.27■□□□□ 0.68
SNX5-214ENST00000490175 TIMM10P62072 90 aa19.27■□□□□ 0.68
SNX5-214ENST00000490175 IFIT5Q13325 482 aaKnown RBP19.27■□□□□ 0.68
SNX5-214ENST00000490175 ZNF589Q86UQ0 364 aaPredicted RBP19.27■□□□□ 0.68
SNX5-214ENST00000490175 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
SNX5-214ENST00000490175 SLIT2O94813 1529 aa19.27■□□□□ 0.68
SNX5-214ENST00000490175 TOM1O60784 492 aa19.27■□□□□ 0.67
SNX5-214ENST00000490175 MCMDC2Q4G0Z9 681 aa19.27■□□□□ 0.67
SNX5-214ENST00000490175 PAG1Q9NWQ8 432 aa19.27■□□□□ 0.67
SNX5-214ENST00000490175 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
SNX5-214ENST00000490175 ALDH8A1Q9H2A2 487 aaPredicted RBP19.26■□□□□ 0.67
SNX5-214ENST00000490175 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
SNX5-214ENST00000490175 KRT32Q14532 448 aa19.25■□□□□ 0.67
SNX5-214ENST00000490175 TAF7LQ5H9L4 462 aa19.25■□□□□ 0.67
SNX5-214ENST00000490175 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
SNX5-214ENST00000490175 DZIP3Q86Y13 1208 aaKnown RBP19.25■□□□□ 0.67
SNX5-214ENST00000490175 LMBRD1Q9NUN5 540 aa19.25■□□□□ 0.67
SNX5-214ENST00000490175 DDX49Q9Y6V7 483 aaKnown RBP19.25■□□□□ 0.67
SNX5-214ENST00000490175 RREB1Q92766 1687 aa19.25■□□□□ 0.67
SNX5-214ENST00000490175 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
SNX5-214ENST00000490175 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
SNX5-214ENST00000490175 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
SNX5-214ENST00000490175 GPTP24298 496 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 ANKRD1Q15327 319 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 CPA1P15085 419 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 EIF5P55010 431 aaKnown RBP19.24■□□□□ 0.67
SNX5-214ENST00000490175 CTSWP56202 376 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 CCDC158Q5M9N0 1113 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 MARCH10Q8NA82 808 aaPredicted RBP19.24■□□□□ 0.67
SNX5-214ENST00000490175 TTLL11Q8NHH1 800 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 AK7Q96M32 723 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 NDUFB9Q9Y6M9 179 aa19.24■□□□□ 0.67
SNX5-214ENST00000490175 ABCC12Q96J65 1359 aa19.23■□□□□ 0.67
SNX5-214ENST00000490175 GOLIM4O00461 696 aa19.23■□□□□ 0.67
SNX5-214ENST00000490175 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
SNX5-214ENST00000490175 BLOC1S2Q6QNY1 142 aa19.23■□□□□ 0.67
SNX5-214ENST00000490175 ZNF34Q8IZ26 560 aa19.23■□□□□ 0.67
SNX5-214ENST00000490175 CCDC87Q9NVE4 849 aa19.23■□□□□ 0.67
SNX5-214ENST00000490175 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
SNX5-214ENST00000490175 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
SNX5-214ENST00000490175 ANKRD18BA2A2Z9 1011 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms