RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 SLC10A5Q5PT55 438 aa11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 NUTM1Q86Y26 1132 aa11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 TRPM4Q8TD43 1214 aa11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
RN7SL239P-201ENST00000490061 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
RN7SL239P-201ENST00000490061 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
RN7SL239P-201ENST00000490061 KIAA0100Q14667 2235 aaKnown RBP11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 RAD17O75943 681 aa11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 GIGYF2Q6Y7W6 1299 aaKnown RBP11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 DDX46Q7L014 1031 aaKnown RBP11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 ZNF296Q8WUU4 475 aaPredicted RBP11.24□□□□□ -0.61
RN7SL239P-201ENST00000490061 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 NTSR2O95665 410 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 TM4SF4P48230 202 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 PIP4K2AP48426 406 aaPredicted RBP11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 FXR1P51114 621 aaKnown RBP eCLIP11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 HSP90AB3PQ58FF7 597 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 SUSD4Q5VX71 490 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 RASAL3Q86YV0 1011 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 EYA3Q99504 573 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 UTP14AQ9BVJ6 771 aaKnown RBP11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
RN7SL239P-201ENST00000490061 PRAMEF22A3QJZ6 481 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 GPR25O00155 361 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 ZNF609O15014 1411 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 ABCC4O15439 1325 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 KCNQ3O43525 872 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 FKTNO75072 461 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 MMP14P50281 582 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 GRAPQ13588 217 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
RN7SL239P-201ENST00000490061 ANKRD36CQ5JPF3 1778 aa11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 INHBEP58166 350 aa11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 WASHC4Q2M389 1173 aa11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 SAMD7Q7Z3H4 446 aa11.21□□□□□ -0.61
RN7SL239P-201ENST00000490061 UBN2Q6ZU65 1347 aa11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 MKI67P46013 3256 aaKnown RBP11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 YDJCA8MPS7 323 aa11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 PSMD14O00487 310 aa11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 NF2P35240 595 aa11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 TBC1D10BQ4KMP7 808 aaPredicted RBP11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 RBBP6Q7Z6E9 1792 aaKnown RBP11.2□□□□□ -0.62
RN7SL239P-201ENST00000490061 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 NEFMP07197 916 aa11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 GPTP24298 496 aa11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 GGA3Q9NZ52 723 aa11.19□□□□□ -0.62
RN7SL239P-201ENST00000490061 CEP290O15078 2479 aa11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 TCIRG1Q13488 830 aa11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 ARHGEF6Q15052 776 aa11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
RN7SL239P-201ENST00000490061 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 TRIOBPQ9H2D6 2365 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 UNCXA6NJT0 531 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 HSP90B1P14625 803 aaKnown RBP11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 ZBTB3Q9H5J0 574 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
RN7SL239P-201ENST00000490061 SH3TC1Q8TE82 1336 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 TTLL7Q6ZT98 887 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 MCM10Q7L590 875 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 NGEFQ8N5V2 710 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 ERO1AQ96HE7 468 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
RN7SL239P-201ENST00000490061 G3V3G9 751 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 PER1O15534 1290 aaPredicted RBP11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 ECE2O60344 883 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 ARMC9Q7Z3E5 817 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 ARMC5Q96C12 935 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 PHACTR3Q96KR7 559 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 NSFL1CQ9UNZ2 370 aaKnown RBP11.15□□□□□ -0.62
RN7SL239P-201ENST00000490061 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
RN7SL239P-201ENST00000490061 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
RN7SL239P-201ENST00000490061 C6orf229H3BNL8 230 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms