RNA–Protein interactions for RNA: ENST00000489994.5

IFRD1-215, Transcript of interferon related developmental regulator 1, humanhuman

TSL 1 (best)

Gene IFRD1, Length 1,721 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-215ENST00000489994 CRIPAKQ8N1N5 446 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 CDV3Q9UKY7 258 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 MYO5BQ9ULV0 1848 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 EIF2AK4Q9P2K8 1649 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 SLIT1O75093 1534 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 CAMSAP2Q08AD1 1489 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 ZRANB2O95218 330 aaKnown RBP eCLIP6.87□□□□□ -1.313e-10■■■■■ 92.4
IFRD1-215ENST00000489994 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 SATB1Q01826 763 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 ERFEQ4G0M1 354 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 KANK4Q5T7N3 995 aaPredicted RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 CCDC181Q5TID7 509 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 ZNF513Q8N8E2 541 aaPredicted RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 HPS1Q92902 700 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 SLC10A4Q96EP9 437 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 RBM28Q9NW13 759 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 NOVA2Q9UNW9 492 aaKnown RBP6.87□□□□□ -1.31
IFRD1-215ENST00000489994 MAP4K5Q9Y4K4 846 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 PIK3C2BO00750 1634 aa6.87□□□□□ -1.31
IFRD1-215ENST00000489994 SCP2P22307 547 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 LTKP29376 864 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 NR5A1Q13285 461 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 NNTQ13423 1086 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 TMEM164Q5U3C3 297 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 MORC4Q8TE76 937 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 MRVI1Q9Y6F6 885 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 CEP162Q5TB80 1403 aa6.86□□□□□ -1.31
IFRD1-215ENST00000489994 CHD2O14647 1828 aaKnown RBP6.86□□□□□ -1.31
IFRD1-215ENST00000489994 MAP3K1Q13233 1512 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
IFRD1-215ENST00000489994 LCE2BO14633 110 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 PPFIA4O75335 1185 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 SKIP12755 728 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 STK32AQ8WU08 396 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 EVI5LQ96CN4 794 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 MAGEC2Q9UBF1 373 aaPredicted RBP6.85□□□□□ -1.31
IFRD1-215ENST00000489994 FRMD4BQ9Y2L6 1034 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 MAST1Q9Y2H9 1570 aa6.85□□□□□ -1.31
IFRD1-215ENST00000489994 USP17L3A6NCW0 530 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 USP17L4A6NCW7 530 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 GOLGA6L3A6NEY3 463 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 ZBBXA8MT70 800 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 EXOC5O00471 708 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 USP17L2Q6R6M4 530 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 USP17L1Q7RTZ2 530 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 CACTIN-AS1Q8N1I8 211 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 NGEFQ8N5V2 710 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 NFATC2IPQ8NCF5 419 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 HIRIP3Q9BW71 556 aaPredicted RBP6.84□□□□□ -1.31
IFRD1-215ENST00000489994 ZMIZ1Q9ULJ6 1067 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 COL16A1Q07092 1604 aaPredicted RBP6.84□□□□□ -1.31
IFRD1-215ENST00000489994 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 ST8SIA5O15466 376 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 EPB41L2O43491 1005 aaKnown RBP6.84□□□□□ -1.31
IFRD1-215ENST00000489994 ZFYVE27Q5T4F4 411 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 TXNDC2Q86VQ3 553 aa6.84□□□□□ -1.31
IFRD1-215ENST00000489994 DZIP3Q86Y13 1208 aaKnown RBP6.84□□□□□ -1.31
IFRD1-215ENST00000489994 TET3O43151 1660 aa6.84□□□□□ -1.32
IFRD1-215ENST00000489994 RBM47A0AV96 593 aaKnown RBP6.83□□□□□ -1.32
IFRD1-215ENST00000489994 PEX14O75381 377 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 TPM2P07951 284 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 FBXO45P0C2W1 286 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 FSHRP23945 695 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 GRM5P41594 1212 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 DMTNQ08495 405 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 GET4Q7L5D6 327 aaPredicted RBP6.83□□□□□ -1.32
IFRD1-215ENST00000489994 OCSTAMPQ9BR26 566 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 NWD1Q149M9 1564 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 TMEM94Q12767 1356 aa6.83□□□□□ -1.32
IFRD1-215ENST00000489994 UNCXA6NJT0 531 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 CAPN5O15484 640 aaPredicted RBP6.82□□□□□ -1.32
IFRD1-215ENST00000489994 RHBDL3P58872 404 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 LMOD3Q0VAK6 560 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 ZRSR2Q15696 482 aaKnown RBP6.82□□□□□ -1.32
IFRD1-215ENST00000489994 RGL3Q3MIN7 710 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 ZKSCAN2Q63HK3 967 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
IFRD1-215ENST00000489994 SIRT1Q96EB6 747 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 CEP126Q9P2H0 1117 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 SHPRHQ149N8 1683 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 LRRC9Q6ZRR7 1453 aa6.82□□□□□ -1.32
IFRD1-215ENST00000489994 KIF4AO95239 1232 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 DNAJC14Q6Y2X3 702 aaPredicted RBP6.81□□□□□ -1.32
IFRD1-215ENST00000489994 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 KCTD15Q96SI1 283 aaPredicted RBP6.81□□□□□ -1.32
IFRD1-215ENST00000489994 PRDM15P57071 1507 aaPredicted RBP6.81□□□□□ -1.32
IFRD1-215ENST00000489994 LRP6O75581 1613 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 CROCC2H7BZ55 1655 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 FAM196BA6NMK8 535 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L15C9J2P7 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L10C9JJH3 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L13C9JLJ4 530 aa6.81□□□□□ -1.32
IFRD1-215ENST00000489994 USP17L12C9JPN9 530 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms