RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
TFF3-203ENST00000489676 BRIP1Q9BX63 1249 aa13.67□□□□□ -0.22
TFF3-203ENST00000489676 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
TFF3-203ENST00000489676 NEFLP07196 543 aa13.66□□□□□ -0.22
TFF3-203ENST00000489676 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
TFF3-203ENST00000489676 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
TFF3-203ENST00000489676 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
TFF3-203ENST00000489676 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
TFF3-203ENST00000489676 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
TFF3-203ENST00000489676 LRRC37AA6NMS7 1700 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 NPHP1O15259 732 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 SIRT2Q8IXJ6 389 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 TAF1P21675 1872 aa13.65□□□□□ -0.22
TFF3-203ENST00000489676 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 A0A1B0GUL6 1792 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 PNMA6EA0A0J9YXQ4 647 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
TFF3-203ENST00000489676 POLA2Q14181 598 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 NLRP3Q96P20 1036 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 GREM2Q9H772 168 aa13.64□□□□□ -0.23
TFF3-203ENST00000489676 SRGNP10124 158 aa13.63□□□□□ -0.23
TFF3-203ENST00000489676 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
TFF3-203ENST00000489676 SSH3Q8TE77 659 aa13.63□□□□□ -0.23
TFF3-203ENST00000489676 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
TFF3-203ENST00000489676 CHD4Q14839 1912 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 CACNA1SQ13698 1873 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 HOXA10P31260 410 aaPredicted RBP13.62□□□□□ -0.23
TFF3-203ENST00000489676 PDE6BP35913 854 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 ATP8B2P98198 1209 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 CCDC152Q4G0S7 254 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
TFF3-203ENST00000489676 SRGAP3O43295 1099 aa13.61□□□□□ -0.23
TFF3-203ENST00000489676 ITGA6P23229 1130 aa13.61□□□□□ -0.23
TFF3-203ENST00000489676 CCDC85AQ96PX6 553 aaPredicted RBP13.61□□□□□ -0.23
TFF3-203ENST00000489676 SEC31BQ9NQW1 1179 aa13.61□□□□□ -0.23
TFF3-203ENST00000489676 PDZRN3Q9UPQ7 1066 aa13.61□□□□□ -0.23
TFF3-203ENST00000489676 LTBP1Q14766 1721 aa13.61□□□□□ -0.23
TFF3-203ENST00000489676 NPR1P16066 1061 aa13.6□□□□□ -0.23
TFF3-203ENST00000489676 KCNA3P22001 575 aa13.6□□□□□ -0.23
TFF3-203ENST00000489676 CHRNA5P30532 468 aa13.6□□□□□ -0.23
TFF3-203ENST00000489676 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
TFF3-203ENST00000489676 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
TFF3-203ENST00000489676 SLX4Q8IY92 1834 aa13.6□□□□□ -0.23
TFF3-203ENST00000489676 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 TGFB2P61812 414 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
TFF3-203ENST00000489676 HDAC1Q13547 482 aaPredicted RBP13.59□□□□□ -0.23
TFF3-203ENST00000489676 GRAPQ13588 217 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 STYK1Q6J9G0 422 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 GRAPLQ8TC17 118 aaPredicted RBP13.59□□□□□ -0.23
TFF3-203ENST00000489676 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
TFF3-203ENST00000489676 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
TFF3-203ENST00000489676 MASTLQ96GX5 879 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 COPRSQ9NQ92 184 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
TFF3-203ENST00000489676 ANKRD18BA2A2Z9 1011 aa13.58□□□□□ -0.24
TFF3-203ENST00000489676 H0YIN7 160 aa13.58□□□□□ -0.24
TFF3-203ENST00000489676 HMMRO75330 724 aa13.58□□□□□ -0.24
TFF3-203ENST00000489676 DPEP1P16444 411 aa13.58□□□□□ -0.24
TFF3-203ENST00000489676 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
TFF3-203ENST00000489676 ZNF594Q96JF6 807 aaPredicted RBP13.58□□□□□ -0.24
TFF3-203ENST00000489676 CDC5LQ99459 802 aaKnown RBP13.58□□□□□ -0.24
TFF3-203ENST00000489676 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
TFF3-203ENST00000489676 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
TFF3-203ENST00000489676 CCDC57Q2TAC2 916 aa13.57□□□□□ -0.24
TFF3-203ENST00000489676 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
TFF3-203ENST00000489676 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
TFF3-203ENST00000489676 NLGN2Q8NFZ4 835 aa13.57□□□□□ -0.24
TFF3-203ENST00000489676 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
TFF3-203ENST00000489676 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
TFF3-203ENST00000489676 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
TFF3-203ENST00000489676 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
TFF3-203ENST00000489676 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
TFF3-203ENST00000489676 ATG9AQ7Z3C6 839 aa13.56□□□□□ -0.24
TFF3-203ENST00000489676 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
TFF3-203ENST00000489676 KDM2BQ8NHM5 1336 aa13.56□□□□□ -0.24
TFF3-203ENST00000489676 EYA2O00167 538 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 CIAO1O76071 339 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 IGHDP01880 384 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
TFF3-203ENST00000489676 LRRC24Q50LG9 513 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
TFF3-203ENST00000489676 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
TFF3-203ENST00000489676 DCTPP1Q9H773 170 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
TFF3-203ENST00000489676 RIPOR2Q9Y4F9 1068 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 ARAP2Q8WZ64 1704 aa13.55□□□□□ -0.24
TFF3-203ENST00000489676 UTRNP46939 3433 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
TFF3-203ENST00000489676 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 TMC4Q7Z404 712 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
TFF3-203ENST00000489676 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms