RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 MPNDQ8N594 471 aa17.02■□□□□ 0.31
LTA-216ENST00000489638 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 TMPOP42166 694 aaKnown RBP17.01■□□□□ 0.31
LTA-216ENST00000489638 AIMP1Q12904 312 aaKnown RBP17.01■□□□□ 0.31
LTA-216ENST00000489638 GRAPQ13588 217 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 SAPCD2Q86UD0 394 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
LTA-216ENST00000489638 NECTIN2Q92692 538 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 GLIS2Q9BZE0 524 aaPredicted RBP17.01■□□□□ 0.31
LTA-216ENST00000489638 PGAP2Q9UHJ9 254 aa17.01■□□□□ 0.31
LTA-216ENST00000489638 RAD17O75943 681 aa17■□□□□ 0.31
LTA-216ENST00000489638 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
LTA-216ENST00000489638 HIRAP54198 1017 aaPredicted RBP17■□□□□ 0.31
LTA-216ENST00000489638 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
LTA-216ENST00000489638 TCIRG1Q13488 830 aa17■□□□□ 0.31
LTA-216ENST00000489638 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
LTA-216ENST00000489638 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
LTA-216ENST00000489638 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
LTA-216ENST00000489638 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
LTA-216ENST00000489638 AOC2O75106 756 aa16.99■□□□□ 0.31
LTA-216ENST00000489638 MAP2K2P36507 400 aa16.99■□□□□ 0.31
LTA-216ENST00000489638 KRT24Q2M2I5 525 aa16.99■□□□□ 0.31
LTA-216ENST00000489638 TRPM4Q8TD43 1214 aa16.99■□□□□ 0.31
LTA-216ENST00000489638 DDX60Q8IY21 1712 aaKnown RBP16.98■□□□□ 0.31
LTA-216ENST00000489638 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
LTA-216ENST00000489638 TNIP1Q15025 636 aa16.98■□□□□ 0.31
LTA-216ENST00000489638 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
LTA-216ENST00000489638 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
LTA-216ENST00000489638 BCL2L13Q9BXK5 485 aa16.98■□□□□ 0.31
LTA-216ENST00000489638 TAF1P21675 1872 aa16.97■□□□□ 0.31
LTA-216ENST00000489638 CHL1O00533 1208 aa16.97■□□□□ 0.31
LTA-216ENST00000489638 TMC4Q7Z404 712 aa16.97■□□□□ 0.31
LTA-216ENST00000489638 CHPF2Q9P2E5 772 aa16.97■□□□□ 0.31
LTA-216ENST00000489638 TSKSQ9UJT2 592 aa16.97■□□□□ 0.31
LTA-216ENST00000489638 COL4A1P02462 1669 aa16.96■□□□□ 0.31
LTA-216ENST00000489638 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
LTA-216ENST00000489638 RALBP1Q15311 655 aa16.95■□□□□ 0.3
LTA-216ENST00000489638 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
LTA-216ENST00000489638 ZNF408Q9H9D4 720 aa16.95■□□□□ 0.3
LTA-216ENST00000489638 CNOT7Q9UIV1 285 aaKnown RBP16.95■□□□□ 0.3
LTA-216ENST00000489638 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
LTA-216ENST00000489638 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
LTA-216ENST00000489638 CDC37L1Q7L3B6 337 aa16.94■□□□□ 0.3
LTA-216ENST00000489638 CCDC146Q8IYE0 955 aa16.94■□□□□ 0.3
LTA-216ENST00000489638 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
LTA-216ENST00000489638 ISCA1Q9BUE6 129 aa16.94■□□□□ 0.3
LTA-216ENST00000489638 CA12O43570 354 aa16.93■□□□□ 0.3
LTA-216ENST00000489638 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
LTA-216ENST00000489638 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
LTA-216ENST00000489638 CELF1Q92879 486 aaKnown RBP16.93■□□□□ 0.3
LTA-216ENST00000489638 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
LTA-216ENST00000489638 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
LTA-216ENST00000489638 HOXB7P09629 217 aa16.92■□□□□ 0.3
LTA-216ENST00000489638 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
LTA-216ENST00000489638 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
LTA-216ENST00000489638 FAM89AQ96GI7 184 aa16.92■□□□□ 0.3
LTA-216ENST00000489638 H7C1D1 291 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 PSMD14O00487 310 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 EGFRP00533 1210 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 ANKRD13DQ6ZTN6 518 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 DPF2Q92785 391 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 DBNDD1Q9H9R9 158 aa16.91■□□□□ 0.3
LTA-216ENST00000489638 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
LTA-216ENST00000489638 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
LTA-216ENST00000489638 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 CCDC85CA6NKD9 419 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 GPSM2P81274 684 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
LTA-216ENST00000489638 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
LTA-216ENST00000489638 NOGQ13253 232 aa16.89■□□□□ 0.3
LTA-216ENST00000489638 RUNDC1Q96C34 613 aa16.89■□□□□ 0.3
LTA-216ENST00000489638 MYBBP1AQ9BQG0 1328 aaKnown RBP16.89■□□□□ 0.29
LTA-216ENST00000489638 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
LTA-216ENST00000489638 ECE2O60344 883 aa16.89■□□□□ 0.29
LTA-216ENST00000489638 HUNKP57058 714 aa16.89■□□□□ 0.29
LTA-216ENST00000489638 TBC1D10BQ4KMP7 808 aaPredicted RBP16.89■□□□□ 0.29
LTA-216ENST00000489638 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
LTA-216ENST00000489638 KCNQ5Q9NR82 932 aa16.89■□□□□ 0.29
LTA-216ENST00000489638 C6orf229H3BNL8 230 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
LTA-216ENST00000489638 RGS19P49795 217 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
LTA-216ENST00000489638 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 TBC1D16Q8TBP0 767 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 MCOLN1Q9GZU1 580 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
LTA-216ENST00000489638 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
LTA-216ENST00000489638 IRS4O14654 1257 aaPredicted RBP16.87■□□□□ 0.29
LTA-216ENST00000489638 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
LTA-216ENST00000489638 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
LTA-216ENST00000489638 EYA3Q99504 573 aa16.87■□□□□ 0.29
LTA-216ENST00000489638 SCN9AQ15858 1988 aa16.86■□□□□ 0.29
LTA-216ENST00000489638 FAM155AB1AL88 458 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms