RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 GRIN3BO60391 1043 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 HOXA10P31260 410 aaPredicted RBP9.98□□□□□ -0.81
SSR1-210ENST00000489567 UBE3BQ7Z3V4 1068 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 RPGRQ92834 1020 aaKnown RBP9.98□□□□□ -0.81
SSR1-210ENST00000489567 CNKSR1Q969H4 720 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 CACNA1SQ13698 1873 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
SSR1-210ENST00000489567 CDHR2Q9BYE9 1310 aa9.97□□□□□ -0.81
SSR1-210ENST00000489567 SF3B3Q15393 1217 aaKnown RBP9.97□□□□□ -0.81
SSR1-210ENST00000489567 ARHGAP27Q6ZUM4 889 aa9.97□□□□□ -0.81
SSR1-210ENST00000489567 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
SSR1-210ENST00000489567 SRCIN1Q9C0H9 1055 aa9.97□□□□□ -0.81
SSR1-210ENST00000489567 ABCC4O15439 1325 aa9.97□□□□□ -0.81
SSR1-210ENST00000489567 PDE8AO60658 829 aa9.96□□□□□ -0.81
SSR1-210ENST00000489567 TRIM27P14373 513 aa9.96□□□□□ -0.81
SSR1-210ENST00000489567 PRELPP51888 382 aa9.96□□□□□ -0.81
SSR1-210ENST00000489567 FRAT1Q92837 279 aaPredicted RBP9.96□□□□□ -0.81
SSR1-210ENST00000489567 RBM17Q96I25 401 aaKnown RBP9.96□□□□□ -0.81
SSR1-210ENST00000489567 CRAMP1Q96RY5 1269 aa9.96□□□□□ -0.81
SSR1-210ENST00000489567 TAF1P21675 1872 aa9.96□□□□□ -0.81
SSR1-210ENST00000489567 KIF16BQ96L93 1317 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 NFKBIEO00221 500 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 GRM8O00222 908 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 ALDH1L1O75891 902 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 NBPF7P0C2Y1 421 aaPredicted RBP9.96□□□□□ -0.82
SSR1-210ENST00000489567 ALDH1B1P30837 517 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 RASSF7Q02833 373 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 CELF1Q92879 486 aaKnown RBP9.96□□□□□ -0.82
SSR1-210ENST00000489567 SEC31BQ9NQW1 1179 aa9.96□□□□□ -0.82
SSR1-210ENST00000489567 CTSWP56202 376 aa9.95□□□□□ -0.82
SSR1-210ENST00000489567 EPHA10Q5JZY3 1008 aa9.95□□□□□ -0.82
SSR1-210ENST00000489567 TTLL11Q8NHH1 800 aa9.95□□□□□ -0.82
SSR1-210ENST00000489567 ARHGAP45Q92619 1136 aa9.95□□□□□ -0.82
SSR1-210ENST00000489567 API5Q9BZZ5 524 aaKnown RBP9.95□□□□□ -0.82
SSR1-210ENST00000489567 SNED1Q8TER0 1413 aa9.95□□□□□ -0.82
SSR1-210ENST00000489567 PPEF1O14829 653 aaPredicted RBP9.94□□□□□ -0.82
SSR1-210ENST00000489567 FOXO4P98177 505 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 ATF7IPQ6VMQ6 1270 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 DDX46Q7L014 1031 aaKnown RBP9.94□□□□□ -0.82
SSR1-210ENST00000489567 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 USP44Q9H0E7 712 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 GREM2Q9H772 168 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 C9orf78Q9NZ63 289 aaPredicted RBP9.94□□□□□ -0.82
SSR1-210ENST00000489567 UTYO14607 1347 aa9.94□□□□□ -0.82
SSR1-210ENST00000489567 GRAPQ13588 217 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 GRAPLQ8TC17 118 aaPredicted RBP9.93□□□□□ -0.82
SSR1-210ENST00000489567 SUCLG2Q96I99 432 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
SSR1-210ENST00000489567 CSF1RP07333 972 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 FAM161AQ3B820 660 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 CCDC152Q4G0S7 254 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 RCAN3Q9UKA8 241 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 ATP6V0A2Q9Y487 856 aa9.93□□□□□ -0.82
SSR1-210ENST00000489567 FER1L6Q2WGJ9 1857 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
SSR1-210ENST00000489567 BBOX1O75936 387 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 RLBP1P12271 317 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 HSP90B1P14625 803 aaKnown RBP9.92□□□□□ -0.82
SSR1-210ENST00000489567 CCT4P50991 539 aaKnown RBP9.92□□□□□ -0.82
SSR1-210ENST00000489567 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 ZKSCAN2Q63HK3 967 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 INTS3Q68E01 1043 aaKnown RBP9.92□□□□□ -0.82
SSR1-210ENST00000489567 CHD4Q14839 1912 aa9.92□□□□□ -0.82
SSR1-210ENST00000489567 YY1P25490 414 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 RPS8P62241 208 aaKnown RBP9.91□□□□□ -0.82
SSR1-210ENST00000489567 C9orf131Q5VYM1 1079 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 LMBR1LQ6UX01 489 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 MEIS3Q99687 375 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 MYH3P11055 1940 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 PLIN1O60240 522 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
SSR1-210ENST00000489567 ITGA6P23229 1130 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 SOGA3Q5TF21 947 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 SAMD1Q6SPF0 538 aaPredicted RBP9.91□□□□□ -0.82
SSR1-210ENST00000489567 SP8Q8IXZ3 490 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 TAOK3Q9H2K8 898 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 BICC1Q9H694 974 aaKnown RBP9.91□□□□□ -0.82
SSR1-210ENST00000489567 RTL9Q8NET4 1388 aa9.91□□□□□ -0.82
SSR1-210ENST00000489567 SBF1O95248 1867 aa9.9□□□□□ -0.82
SSR1-210ENST00000489567 RTKN2Q8IZC4 609 aa9.9□□□□□ -0.82
SSR1-210ENST00000489567 ANKRD44Q8N8A2 993 aa9.9□□□□□ -0.82
SSR1-210ENST00000489567 ZNF277Q9NRM2 450 aaPredicted RBP9.9□□□□□ -0.82
SSR1-210ENST00000489567 RNF181Q9P0P0 153 aa9.9□□□□□ -0.82
SSR1-210ENST00000489567 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
SSR1-210ENST00000489567 LRRC37AA6NMS7 1700 aa9.9□□□□□ -0.83
SSR1-210ENST00000489567 LMNB1P20700 586 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
SSR1-210ENST00000489567 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 ANKRD18AQ8IVF6 992 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 PANK1Q8TE04 598 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 CHMP3Q9Y3E7 222 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 DUOX1Q9NRD9 1551 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 WTIPA6NIX2 430 aaPredicted RBP9.89□□□□□ -0.83
SSR1-210ENST00000489567 GPSM2P81274 684 aa9.89□□□□□ -0.83
SSR1-210ENST00000489567 RABL6Q3YEC7 729 aaPredicted RBP9.89□□□□□ -0.83
SSR1-210ENST00000489567 DZIP1LQ8IYY4 767 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms