RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 IGKV5-2P06315 115 aa24.3■■□□□ 1.48
MRPL55-230ENST00000489430 HSPA6P17066 643 aa24.3■■□□□ 1.48
MRPL55-230ENST00000489430 G2E3Q7L622 706 aa24.3■■□□□ 1.48
MRPL55-230ENST00000489430 PDE8AO60658 829 aa24.29■■□□□ 1.48
MRPL55-230ENST00000489430 FKBP5Q13451 457 aaPredicted RBP24.29■■□□□ 1.48
MRPL55-230ENST00000489430 L3MBTL3Q96JM7 780 aaPredicted RBP24.29■■□□□ 1.48
MRPL55-230ENST00000489430 RTL5Q5HYW3 569 aaPredicted RBP24.28■■□□□ 1.48
MRPL55-230ENST00000489430 CCDC88AQ3V6T2 1871 aa24.28■■□□□ 1.48
MRPL55-230ENST00000489430 WDR90Q96KV7 1748 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 IQCA1LA6NCM1 817 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 NEURL1BA8MQ27 555 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 POTECB2RU33 542 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 CCDC152Q4G0S7 254 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 DPP8Q6V1X1 898 aaPredicted RBP24.27■■□□□ 1.48
MRPL55-230ENST00000489430 MPNDQ8N594 471 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 DNAAF4Q8WXU2 420 aa24.27■■□□□ 1.48
MRPL55-230ENST00000489430 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
MRPL55-230ENST00000489430 LARGE2Q8N3Y3 721 aa24.26■■□□□ 1.47
MRPL55-230ENST00000489430 SMC1BQ8NDV3 1235 aa24.26■■□□□ 1.47
MRPL55-230ENST00000489430 LINS1Q8NG48 757 aa24.26■■□□□ 1.47
MRPL55-230ENST00000489430 ZNF428Q96B54 188 aa24.26■■□□□ 1.47
MRPL55-230ENST00000489430 DDX60Q8IY21 1712 aaKnown RBP24.26■■□□□ 1.47
MRPL55-230ENST00000489430 LAMB2P55268 1798 aa24.25■■□□□ 1.47
MRPL55-230ENST00000489430 RPS8P62241 208 aaKnown RBP24.25■■□□□ 1.47
MRPL55-230ENST00000489430 GPC2Q8N158 579 aa24.25■■□□□ 1.47
MRPL55-230ENST00000489430 CELF1Q92879 486 aaKnown RBP24.24■■□□□ 1.47
MRPL55-230ENST00000489430 H7C1W4 665 aa24.23■■□□□ 1.47
MRPL55-230ENST00000489430 EIF6P56537 245 aaKnown RBP24.23■■□□□ 1.47
MRPL55-230ENST00000489430 GCKRQ14397 625 aa24.23■■□□□ 1.47
MRPL55-230ENST00000489430 CWF19L2Q2TBE0 894 aaKnown RBP24.23■■□□□ 1.47
MRPL55-230ENST00000489430 CACNA1FO60840 1977 aa24.23■■□□□ 1.47
MRPL55-230ENST00000489430 ZNF541Q9H0D2 1346 aa24.22■■□□□ 1.47
MRPL55-230ENST00000489430 PPIP5K2O43314 1243 aa24.22■■□□□ 1.47
MRPL55-230ENST00000489430 SLFN5Q08AF3 891 aa24.22■■□□□ 1.47
MRPL55-230ENST00000489430 NIM1KQ8IY84 436 aa24.22■■□□□ 1.47
MRPL55-230ENST00000489430 APLP1P51693 650 aa24.21■■□□□ 1.47
MRPL55-230ENST00000489430 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
MRPL55-230ENST00000489430 PLA2G12BQ9BX93 195 aa24.21■■□□□ 1.47
MRPL55-230ENST00000489430 RTL9Q8NET4 1388 aa24.2■■□□□ 1.46
MRPL55-230ENST00000489430 CTSWP56202 376 aa24.2■■□□□ 1.46
MRPL55-230ENST00000489430 SLC51AQ86UW1 340 aa24.2■■□□□ 1.46
MRPL55-230ENST00000489430 AOC3Q16853 763 aa24.19■■□□□ 1.46
MRPL55-230ENST00000489430 ZNRF3Q9ULT6 936 aa24.19■■□□□ 1.46
MRPL55-230ENST00000489430 DIEXFQ68CQ4 756 aaKnown RBP24.18■■□□□ 1.46
MRPL55-230ENST00000489430 UBE3BQ7Z3V4 1068 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
MRPL55-230ENST00000489430 TTLL11Q8NHH1 800 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 CDC5LQ99459 802 aaKnown RBP24.18■■□□□ 1.46
MRPL55-230ENST00000489430 SEC31BQ9NQW1 1179 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 PODXL2Q9NZ53 605 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 HACL1Q9UJ83 578 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 NSFL1CQ9UNZ2 370 aaKnown RBP24.18■■□□□ 1.46
MRPL55-230ENST00000489430 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
MRPL55-230ENST00000489430 BEND3Q5T5X7 828 aa24.17■■□□□ 1.46
MRPL55-230ENST00000489430 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
MRPL55-230ENST00000489430 TAF1DQ9H5J8 278 aaPredicted RBP24.17■■□□□ 1.46
MRPL55-230ENST00000489430 COL4A5P29400 1685 aa24.17■■□□□ 1.46
MRPL55-230ENST00000489430 CT47B1P0C2W7 299 aaPredicted RBP24.16■■□□□ 1.46
MRPL55-230ENST00000489430 CASP7P55210 303 aa24.16■■□□□ 1.46
MRPL55-230ENST00000489430 PNMA8AQ86V59 439 aaPredicted RBP24.16■■□□□ 1.46
MRPL55-230ENST00000489430 ANKRD18AQ8IVF6 992 aa24.16■■□□□ 1.46
MRPL55-230ENST00000489430 EYA3Q99504 573 aa24.16■■□□□ 1.46
MRPL55-230ENST00000489430 CEP350Q5VT06 3117 aa24.15■■□□□ 1.46
MRPL55-230ENST00000489430 WASHC4Q2M389 1173 aa24.15■■□□□ 1.46
MRPL55-230ENST00000489430 F6X3S4 739 aa24.14■■□□□ 1.45
MRPL55-230ENST00000489430 GPSM2P81274 684 aa24.14■■□□□ 1.45
MRPL55-230ENST00000489430 LDHDQ86WU2 507 aa24.14■■□□□ 1.45
MRPL55-230ENST00000489430 SCN4AP35499 1836 aa24.14■■□□□ 1.45
MRPL55-230ENST00000489430 PTPRCP08575 1304 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 ALDH1L1O75891 902 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 CSF1RP07333 972 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 ALDH1L2Q3SY69 923 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 CHADLQ6NUI6 762 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 BSDC1Q9NW68 430 aaPredicted RBP24.13■■□□□ 1.45
MRPL55-230ENST00000489430 POLLQ9UGP5 575 aa24.13■■□□□ 1.45
MRPL55-230ENST00000489430 DUOX1Q9NRD9 1551 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 LMOD1P29536 600 aaPredicted RBP24.12■■□□□ 1.45
MRPL55-230ENST00000489430 EPHX2P34913 555 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 TNIP1Q15025 636 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 MRPL50Q8N5N7 158 aaKnown RBP24.12■■□□□ 1.45
MRPL55-230ENST00000489430 TBC1D16Q8TBP0 767 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 GREM2Q9H772 168 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 GJA3Q9Y6H8 435 aa24.12■■□□□ 1.45
MRPL55-230ENST00000489430 C6orf229H3BNL8 230 aa24.11■■□□□ 1.45
MRPL55-230ENST00000489430 CXCL9Q07325 125 aa24.11■■□□□ 1.45
MRPL55-230ENST00000489430 CDCA7LQ96GN5 454 aa24.11■■□□□ 1.45
MRPL55-230ENST00000489430 CCDC85AQ96PX6 553 aaPredicted RBP24.11■■□□□ 1.45
MRPL55-230ENST00000489430 ANKIB1Q9P2G1 1089 aa24.11■■□□□ 1.45
MRPL55-230ENST00000489430 XDHP47989 1333 aa24.1■■□□□ 1.45
MRPL55-230ENST00000489430 SRCIN1Q9C0H9 1055 aa24.1■■□□□ 1.45
MRPL55-230ENST00000489430 GGA1Q9UJY5 639 aa24.1■■□□□ 1.45
MRPL55-230ENST00000489430 GRM8O00222 908 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 SCNN1DP51172 638 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 CIAPIN1Q6FI81 312 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 MIER1Q8N108 512 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 SSH1Q8WYL5 1049 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 ZC3H12CQ9C0D7 883 aaKnown RBP24.09■■□□□ 1.45
MRPL55-230ENST00000489430 TAF1P21675 1872 aa24.09■■□□□ 1.45
MRPL55-230ENST00000489430 COL4A1P02462 1669 aa24.08■■□□□ 1.45
MRPL55-230ENST00000489430 IGHMBP2P38935 993 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms