RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-209ENST00000489419 NUP188Q5SRE5 1749 aa10.61□□□□□ -0.71
CSMD2-209ENST00000489419 A1BGP04217 495 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 PSMA5P28066 241 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 PTH1RQ03431 593 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 PKP1Q13835 747 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 TSGA10IPQ3SY00 556 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 RNF20Q5VTR2 975 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 LMBR1LQ6UX01 489 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 TTLL7Q6ZT98 887 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 ALDH8A1Q9H2A2 487 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 BOLA2Q9H3K6 86 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 TFCP2Q12800 502 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 NMIQ13287 307 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 KLHDC4Q8TBB5 520 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 FSD1Q9BTV5 496 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 ISCA1Q9BUE6 129 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 GRPEL1Q9HAV7 217 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 TLR7Q9NYK1 1049 aaKnown RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 HMG20BQ9P0W2 317 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 WDR33Q9C0J8 1336 aaKnown RBP10.6□□□□□ -0.71
CSMD2-209ENST00000489419 JCADQ9P266 1359 aa10.6□□□□□ -0.71
CSMD2-209ENST00000489419 CIAO1O76071 339 aa10.59□□□□□ -0.71
CSMD2-209ENST00000489419 IL15P40933 162 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-209ENST00000489419 HAUS7Q99871 368 aa10.59□□□□□ -0.71
CSMD2-209ENST00000489419 DBNLQ9UJU6 430 aaKnown RBP10.59□□□□□ -0.71
CSMD2-209ENST00000489419 MED23Q9ULK4 1368 aa10.59□□□□□ -0.71
CSMD2-209ENST00000489419 AK2P54819 239 aa10.59□□□□□ -0.71
CSMD2-209ENST00000489419 TCIRG1Q13488 830 aa10.59□□□□□ -0.71
CSMD2-209ENST00000489419 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
CSMD2-209ENST00000489419 RRAGDQ9NQL2 400 aaPredicted RBP10.59□□□□□ -0.71
CSMD2-209ENST00000489419 RBM8AQ9Y5S9 174 aaKnown RBP10.59□□□□□ -0.71
CSMD2-209ENST00000489419 STARD3NLO95772 234 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 MBD3O95983 291 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
CSMD2-209ENST00000489419 ZNF445P59923 1031 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 CREB3L3Q68CJ9 461 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 RUFY3Q7L099 469 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 PDRG1Q9NUG6 133 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 ANKRD1Q15327 319 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 USPL1Q5W0Q7 1092 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 ATG9AQ7Z3C6 839 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 JARID2Q92833 1246 aaPredicted RBP10.58□□□□□ -0.72
CSMD2-209ENST00000489419 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
CSMD2-209ENST00000489419 PLA2G12BQ9BX93 195 aa10.58□□□□□ -0.72
CSMD2-209ENST00000489419 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
CSMD2-209ENST00000489419 RPAP1Q9BWH6 1393 aaPredicted RBP10.57□□□□□ -0.72
CSMD2-209ENST00000489419 KCNJ4P48050 445 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 KRT32Q14532 448 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 BTG4Q9NY30 223 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 LRP6O75581 1613 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 EYA2O00167 538 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 SLC27A2O14975 620 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 PRPF40AO75400 957 aaKnown RBP10.57□□□□□ -0.72
CSMD2-209ENST00000489419 RGS22Q8NE09 1264 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSMD2-209ENST00000489419 PIGBQ92521 554 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 TOGARAM1Q9Y4F4 1720 aa10.57□□□□□ -0.72
CSMD2-209ENST00000489419 TAF5LO75529 589 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 PCCAP05165 728 aaPredicted RBP10.56□□□□□ -0.72
CSMD2-209ENST00000489419 KIF6Q6ZMV9 814 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
CSMD2-209ENST00000489419 DBNDD2Q9BQY9 259 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 ZBTB3Q9H5J0 574 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 PRDM10Q9NQV6 1147 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 TJP1Q07157 1748 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 KBTBD3Q8NAB2 608 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
CSMD2-209ENST00000489419 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 ATP6V1DQ9Y5K8 247 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 PALLDQ8WX93 1383 aa10.56□□□□□ -0.72
CSMD2-209ENST00000489419 ADCK5Q3MIX3 580 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 MCMDC2Q4G0Z9 681 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 GAS2L3Q86XJ1 694 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 U3KPZ7 1027 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-209ENST00000489419 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-209ENST00000489419 COL22A1Q8NFW1 1626 aaPredicted RBP10.55□□□□□ -0.72
CSMD2-209ENST00000489419 BCL9O00512 1426 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 CSF1RP07333 972 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 DNAJC10Q8IXB1 793 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 TMEM87AQ8NBN3 555 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 HELLSQ9NRZ9 838 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 ASAP1Q9ULH1 1129 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 AKAP2Q9Y2D5 859 aa10.55□□□□□ -0.72
CSMD2-209ENST00000489419 MAP3K15Q6ZN16 1313 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 SH3TC1Q8TE82 1336 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 CDHR2Q9BYE9 1310 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 EXOC5O00471 708 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 ZSCAN22P10073 491 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 CCDC57Q2TAC2 916 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms