RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 DDX46Q7L014 1031 aaKnown RBP17.29■□□□□ 0.36
LMO4-203ENST00000489303 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 PSMD1Q99460 953 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 METTL22Q9BUU2 404 aaPredicted RBP17.29■□□□□ 0.36
LMO4-203ENST00000489303 ADAMTSL1Q8N6G6 1762 aa17.29■□□□□ 0.36
LMO4-203ENST00000489303 LAMB2P55268 1798 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 IQCA1LA6NCM1 817 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 VAMP4O75379 141 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 EPHX2P34913 555 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 CWC25Q9NXE8 425 aaPredicted RBP17.28■□□□□ 0.36
LMO4-203ENST00000489303 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 GJA3Q9Y6H8 435 aa17.28■□□□□ 0.36
LMO4-203ENST00000489303 TAF1P21675 1872 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 PI4KAP2A4QPH2 592 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 BBOX1O75936 387 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.36
LMO4-203ENST00000489303 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
LMO4-203ENST00000489303 PI4KAP1Q8N8J0 262 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
LMO4-203ENST00000489303 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
LMO4-203ENST00000489303 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
LMO4-203ENST00000489303 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.35
LMO4-203ENST00000489303 ABCC4O15439 1325 aa17.26■□□□□ 0.35
LMO4-203ENST00000489303 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
LMO4-203ENST00000489303 RTL5Q5HYW3 569 aaPredicted RBP17.26■□□□□ 0.35
LMO4-203ENST00000489303 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
LMO4-203ENST00000489303 FLIIQ13045 1269 aa17.25■□□□□ 0.35
LMO4-203ENST00000489303 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
LMO4-203ENST00000489303 GPC2Q8N158 579 aa17.25■□□□□ 0.35
LMO4-203ENST00000489303 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
LMO4-203ENST00000489303 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
LMO4-203ENST00000489303 COL4A1P02462 1669 aa17.25■□□□□ 0.35
LMO4-203ENST00000489303 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 E9PSI1 815 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
LMO4-203ENST00000489303 EPS15P42566 896 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 SCNN1DP51172 638 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 GRAPQ13588 217 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 SF3B3Q15393 1217 aaKnown RBP17.24■□□□□ 0.35
LMO4-203ENST00000489303 AOC3Q16853 763 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 G2E3Q7L622 706 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 TMC4Q7Z404 712 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
LMO4-203ENST00000489303 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
LMO4-203ENST00000489303 CAPN15O75808 1086 aa17.23■□□□□ 0.35
LMO4-203ENST00000489303 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
LMO4-203ENST00000489303 PPIP5K2O43314 1243 aa17.22■□□□□ 0.35
LMO4-203ENST00000489303 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
LMO4-203ENST00000489303 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
LMO4-203ENST00000489303 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
LMO4-203ENST00000489303 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
LMO4-203ENST00000489303 PDE8AO60658 829 aa17.21■□□□□ 0.35
LMO4-203ENST00000489303 VEGFBP49765 207 aa17.21■□□□□ 0.35
LMO4-203ENST00000489303 DNAAF4Q8WXU2 420 aa17.21■□□□□ 0.35
LMO4-203ENST00000489303 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
LMO4-203ENST00000489303 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
LMO4-203ENST00000489303 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
LMO4-203ENST00000489303 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
LMO4-203ENST00000489303 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
LMO4-203ENST00000489303 TNS4Q8IZW8 715 aa17.2■□□□□ 0.34
LMO4-203ENST00000489303 MPNDQ8N594 471 aa17.2■□□□□ 0.34
LMO4-203ENST00000489303 NEURL1BA8MQ27 555 aa17.19■□□□□ 0.34
LMO4-203ENST00000489303 CXCL9Q07325 125 aa17.19■□□□□ 0.34
LMO4-203ENST00000489303 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
LMO4-203ENST00000489303 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
LMO4-203ENST00000489303 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
LMO4-203ENST00000489303 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
LMO4-203ENST00000489303 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
LMO4-203ENST00000489303 TRAF5O00463 557 aa17.18■□□□□ 0.34
LMO4-203ENST00000489303 FOXN1O15353 648 aa17.18■□□□□ 0.34
LMO4-203ENST00000489303 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
LMO4-203ENST00000489303 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
LMO4-203ENST00000489303 JARID2Q92833 1246 aaPredicted RBP17.18■□□□□ 0.34
LMO4-203ENST00000489303 DUOX1Q9NRD9 1551 aa17.18■□□□□ 0.34
LMO4-203ENST00000489303 SHTN1A0MZ66 631 aa17.17■□□□□ 0.34
LMO4-203ENST00000489303 KCNA4P22459 653 aa17.17■□□□□ 0.34
LMO4-203ENST00000489303 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
LMO4-203ENST00000489303 CELF1Q92879 486 aaKnown RBP17.17■□□□□ 0.34
LMO4-203ENST00000489303 RTFDC1Q9BY42 306 aaPredicted RBP17.17■□□□□ 0.34
LMO4-203ENST00000489303 YDJCA8MPS7 323 aa17.16■□□□□ 0.34
LMO4-203ENST00000489303 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
LMO4-203ENST00000489303 GCKRQ14397 625 aa17.16■□□□□ 0.34
LMO4-203ENST00000489303 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
LMO4-203ENST00000489303 MIER1Q8N108 512 aa17.16■□□□□ 0.34
LMO4-203ENST00000489303 H7C1W4 665 aa17.15■□□□□ 0.34
LMO4-203ENST00000489303 RAD17O75943 681 aa17.15■□□□□ 0.34
LMO4-203ENST00000489303 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
LMO4-203ENST00000489303 CTSWP56202 376 aa17.15■□□□□ 0.34
LMO4-203ENST00000489303 CCDC85AQ96PX6 553 aaPredicted RBP17.15■□□□□ 0.34
LMO4-203ENST00000489303 ZNRF3Q9ULT6 936 aa17.15■□□□□ 0.34
LMO4-203ENST00000489303 NSFL1CQ9UNZ2 370 aaKnown RBP17.15■□□□□ 0.34
LMO4-203ENST00000489303 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
LMO4-203ENST00000489303 CST9Q5W186 159 aa17.14■□□□□ 0.33
LMO4-203ENST00000489303 ANKRD18AQ8IVF6 992 aa17.14■□□□□ 0.33
LMO4-203ENST00000489303 GPR101Q96P66 508 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms