RNA–Protein interactions for RNA: ENST00000489302.5

PDZD8-203, Transcript of PDZ domain containing 8, humanhuman

TSL 3

Gene PDZD8, Length 740 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-203ENST00000489302 F6X3S4 739 aa13.05□□□□□ -0.32
PDZD8-203ENST00000489302 BBOX1O75936 387 aa13.05□□□□□ -0.32
PDZD8-203ENST00000489302 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
PDZD8-203ENST00000489302 GRAPQ13588 217 aa13.05□□□□□ -0.32
PDZD8-203ENST00000489302 GRAPLQ8TC17 118 aaPredicted RBP13.05□□□□□ -0.32
PDZD8-203ENST00000489302 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
PDZD8-203ENST00000489302 ZC3H4Q9UPT8 1303 aaKnown RBP13.05□□□□□ -0.32
PDZD8-203ENST00000489302 LAMB2P55268 1798 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 TAF1P21675 1872 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 TOMM70O94826 608 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
PDZD8-203ENST00000489302 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 DNAAF4Q8WXU2 420 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
PDZD8-203ENST00000489302 PSMD1Q99460 953 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
PDZD8-203ENST00000489302 DDX60Q8IY21 1712 aaKnown RBP13.03□□□□□ -0.32
PDZD8-203ENST00000489302 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 E9PSI1 815 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 PDE8AO60658 829 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
PDZD8-203ENST00000489302 SLFN5Q08AF3 891 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
PDZD8-203ENST00000489302 MPNDQ8N594 471 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 JDP2Q8WYK2 163 aa13.03□□□□□ -0.32
PDZD8-203ENST00000489302 DICER1Q9UPY3 1922 aaKnown RBP13.02□□□□□ -0.32
PDZD8-203ENST00000489302 POTECB2RU33 542 aa13.02□□□□□ -0.33
PDZD8-203ENST00000489302 PPIP5K2O43314 1243 aa13.02□□□□□ -0.33
PDZD8-203ENST00000489302 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.33
PDZD8-203ENST00000489302 AOC3Q16853 763 aa13.02□□□□□ -0.33
PDZD8-203ENST00000489302 UBE3BQ7Z3V4 1068 aa13.02□□□□□ -0.33
PDZD8-203ENST00000489302 ZNF541Q9H0D2 1346 aa13.02□□□□□ -0.33
PDZD8-203ENST00000489302 RPS8P62241 208 aaKnown RBP13.01□□□□□ -0.33
PDZD8-203ENST00000489302 CCDC152Q4G0S7 254 aa13.01□□□□□ -0.33
PDZD8-203ENST00000489302 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
PDZD8-203ENST00000489302 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
PDZD8-203ENST00000489302 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
PDZD8-203ENST00000489302 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
PDZD8-203ENST00000489302 H7C1W4 665 aa13□□□□□ -0.33
PDZD8-203ENST00000489302 EIF6P56537 245 aaKnown RBP13□□□□□ -0.33
PDZD8-203ENST00000489302 GCKRQ14397 625 aa13□□□□□ -0.33
PDZD8-203ENST00000489302 SLC4A10Q6U841 1118 aa13□□□□□ -0.33
PDZD8-203ENST00000489302 LINS1Q8NG48 757 aa13□□□□□ -0.33
PDZD8-203ENST00000489302 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
PDZD8-203ENST00000489302 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
PDZD8-203ENST00000489302 COL4A1P02462 1669 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 CDHR2Q9BYE9 1310 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 FZD9O00144 591 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 HSPA6P17066 643 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 CTSWP56202 376 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 GPSM2P81274 684 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 NIM1KQ8IY84 436 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 SUPT20HQ8NEM7 779 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 COL4A5P29400 1685 aa12.99□□□□□ -0.33
PDZD8-203ENST00000489302 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
PDZD8-203ENST00000489302 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
PDZD8-203ENST00000489302 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
PDZD8-203ENST00000489302 TTLL11Q8NHH1 800 aa12.98□□□□□ -0.33
PDZD8-203ENST00000489302 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
PDZD8-203ENST00000489302 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
PDZD8-203ENST00000489302 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
PDZD8-203ENST00000489302 GREM2Q9H772 168 aa12.98□□□□□ -0.33
PDZD8-203ENST00000489302 POTEIP0CG38 1075 aa12.97□□□□□ -0.33
PDZD8-203ENST00000489302 POTEJP0CG39 1038 aa12.97□□□□□ -0.33
PDZD8-203ENST00000489302 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
PDZD8-203ENST00000489302 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
PDZD8-203ENST00000489302 ANKIB1Q9P2G1 1089 aa12.97□□□□□ -0.33
PDZD8-203ENST00000489302 CACNA1FO60840 1977 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 CASP7P55210 303 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 KIAA2012Q0VF49 1180 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.33
PDZD8-203ENST00000489302 GPC2Q8N158 579 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 C9orf78Q9NZ63 289 aaPredicted RBP12.96□□□□□ -0.33
PDZD8-203ENST00000489302 POLLQ9UGP5 575 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
PDZD8-203ENST00000489302 WDR90Q96KV7 1748 aa12.96□□□□□ -0.34
PDZD8-203ENST00000489302 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 RAD17O75943 681 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 HTRA3P83110 453 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDZD8-203ENST00000489302 FSTL1Q12841 308 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
PDZD8-203ENST00000489302 TBC1D16Q8TBP0 767 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
PDZD8-203ENST00000489302 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
PDZD8-203ENST00000489302 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
PDZD8-203ENST00000489302 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
PDZD8-203ENST00000489302 UFL1O94874 794 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms