RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 KRT24Q2M2I5 525 aa15.06■□□□□ 0
USP11-210ENST00000489030 NLRP3Q96P20 1036 aa15.06■□□□□ 0
USP11-210ENST00000489030 ZNF408Q9H9D4 720 aa15.06■□□□□ 0
USP11-210ENST00000489030 TAF1P21675 1872 aa15.06■□□□□ 0
USP11-210ENST00000489030 GRIPAP1Q4V328 841 aa15.05■□□□□ -0
USP11-210ENST00000489030 PARP10Q53GL7 1025 aa15.05■□□□□ -0
USP11-210ENST00000489030 PPP1R42Q7Z4L9 355 aa15.05■□□□□ -0
USP11-210ENST00000489030 MIER1Q8N108 512 aa15.05■□□□□ -0
USP11-210ENST00000489030 PGAP2Q9UHJ9 254 aa15.05■□□□□ -0
USP11-210ENST00000489030 TSPYL4Q9UJ04 414 aa15.05■□□□□ -0
USP11-210ENST00000489030 DUOX1Q9NRD9 1551 aa15.05■□□□□ -0
USP11-210ENST00000489030 LAMB2P55268 1798 aa15.04■□□□□ -0
USP11-210ENST00000489030 ERBB4Q15303 1308 aa15.04■□□□□ -0
USP11-210ENST00000489030 EGFRP00533 1210 aa15.04■□□□□ -0
USP11-210ENST00000489030 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
USP11-210ENST00000489030 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
USP11-210ENST00000489030 CIAPIN1Q6FI81 312 aa15.04■□□□□ -0
USP11-210ENST00000489030 DPP8Q6V1X1 898 aaPredicted RBP15.04■□□□□ -0
USP11-210ENST00000489030 NLRP10Q86W26 655 aa15.04■□□□□ -0
USP11-210ENST00000489030 MPNDQ8N594 471 aa15.04■□□□□ -0
USP11-210ENST00000489030 XAGE3Q8WTP9 111 aa15.04■□□□□ -0
USP11-210ENST00000489030 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
USP11-210ENST00000489030 CASP8AP2Q9UKL3 1982 aa15.04■□□□□ -0
USP11-210ENST00000489030 COPS6Q7L5N1 327 aa15.03■□□□□ -0
USP11-210ENST00000489030 SP8Q8IXZ3 490 aa15.03■□□□□ -0
USP11-210ENST00000489030 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
USP11-210ENST00000489030 MCOLN1Q9GZU1 580 aa15.03■□□□□ -0
USP11-210ENST00000489030 CCER2I3L3R5 266 aa15.02■□□□□ -0
USP11-210ENST00000489030 MAP2K2P36507 400 aa15.02■□□□□ -0
USP11-210ENST00000489030 RGS19P49795 217 aa15.02■□□□□ -0
USP11-210ENST00000489030 USP48Q86UV5 1035 aa15.02■□□□□ -0
USP11-210ENST00000489030 KCNQ5Q9NR82 932 aa15.02■□□□□ -0
USP11-210ENST00000489030 BBOX1O75936 387 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 GRAPQ13588 217 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 SAMD7Q7Z3H4 446 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
USP11-210ENST00000489030 BCL2L13Q9BXK5 485 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 VPS33BQ9H267 617 aa15.01□□□□□ -0.01
USP11-210ENST00000489030 CNOT7Q9UIV1 285 aaKnown RBP15.01□□□□□ -0.01
USP11-210ENST00000489030 NEFMP07197 916 aa15□□□□□ -0.01
USP11-210ENST00000489030 RIPK4P57078 832 aa15□□□□□ -0.01
USP11-210ENST00000489030 MLLT1Q03111 559 aaPredicted RBP15□□□□□ -0.01
USP11-210ENST00000489030 TCIRG1Q13488 830 aa15□□□□□ -0.01
USP11-210ENST00000489030 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
USP11-210ENST00000489030 TRMT112Q9UI30 125 aaKnown RBP15□□□□□ -0.01
USP11-210ENST00000489030 ASTN2O75129 1339 aaPredicted RBP14.99□□□□□ -0.01
USP11-210ENST00000489030 MAPK8IP3Q9UPT6 1336 aa14.99□□□□□ -0.01
USP11-210ENST00000489030 PSMD14O00487 310 aa14.99□□□□□ -0.01
USP11-210ENST00000489030 CELF1Q92879 486 aaKnown RBP14.99□□□□□ -0.01
USP11-210ENST00000489030 DBNDD1Q9H9R9 158 aa14.99□□□□□ -0.01
USP11-210ENST00000489030 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 SH3TC1Q8TE82 1336 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 FAM155AB1AL88 458 aaPredicted RBP14.98□□□□□ -0.01
USP11-210ENST00000489030 ADM5C9JUS6 153 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 RIMBP2O15034 1052 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 BRPF1P55201 1214 aaPredicted RBP14.98□□□□□ -0.01
USP11-210ENST00000489030 GPSM2P81274 684 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 TNIP1Q15025 636 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 TBC1D10BQ4KMP7 808 aaPredicted RBP14.98□□□□□ -0.01
USP11-210ENST00000489030 DDX46Q7L014 1031 aaKnown RBP14.98□□□□□ -0.01
USP11-210ENST00000489030 CDC37L1Q7L3B6 337 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 HHIPL1Q96JK4 782 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
USP11-210ENST00000489030 POLLQ9UGP5 575 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 ANKRD36CQ5JPF3 1778 aa14.98□□□□□ -0.01
USP11-210ENST00000489030 ATP5J2-PTCD1G3V325 749 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
USP11-210ENST00000489030 HUNKP57058 714 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 DGKZQ13574 1117 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 DOK7Q18PE1 504 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 ZC3H15Q8WU90 426 aaKnown RBP14.97□□□□□ -0.01
USP11-210ENST00000489030 CFAP44Q96MT7 982 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
USP11-210ENST00000489030 CDHR2Q9BYE9 1310 aa14.96□□□□□ -0.01
USP11-210ENST00000489030 LRRC37AA6NMS7 1700 aa14.96□□□□□ -0.01
USP11-210ENST00000489030 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
USP11-210ENST00000489030 RBM26Q5T8P6 1007 aaKnown RBP14.96□□□□□ -0.01
USP11-210ENST00000489030 CCDC146Q8IYE0 955 aa14.96□□□□□ -0.01
USP11-210ENST00000489030 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
USP11-210ENST00000489030 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
USP11-210ENST00000489030 H7C1D1 291 aa14.95□□□□□ -0.02
USP11-210ENST00000489030 KRT26Q7Z3Y9 468 aa14.95□□□□□ -0.02
USP11-210ENST00000489030 ISCA1Q9BUE6 129 aa14.95□□□□□ -0.02
USP11-210ENST00000489030 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
USP11-210ENST00000489030 POLR2AP24928 1970 aaKnown RBP14.94□□□□□ -0.02
USP11-210ENST00000489030 CHL1O00533 1208 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 CA12O43570 354 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 WASHC4Q2M389 1173 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 CCDC184Q52MB2 194 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
USP11-210ENST00000489030 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
USP11-210ENST00000489030 ECE2O60344 883 aa14.93□□□□□ -0.02
USP11-210ENST00000489030 KIF23Q02241 960 aaPredicted RBP14.93□□□□□ -0.02
USP11-210ENST00000489030 NOGQ13253 232 aa14.93□□□□□ -0.02
USP11-210ENST00000489030 SF3B3Q15393 1217 aaKnown RBP14.93□□□□□ -0.02
USP11-210ENST00000489030 RGMBQ6NW40 437 aa14.93□□□□□ -0.02
USP11-210ENST00000489030 DPF2Q92785 391 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms