RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 C21orf2O43822 256 aa19.15■□□□□ 0.66
FDPS-213ENST00000489003 INTS3Q68E01 1043 aaKnown RBP19.15■□□□□ 0.66
FDPS-213ENST00000489003 ARHGAP27Q6ZUM4 889 aa19.15■□□□□ 0.66
FDPS-213ENST00000489003 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
FDPS-213ENST00000489003 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
FDPS-213ENST00000489003 UTYO14607 1347 aa19.15■□□□□ 0.66
FDPS-213ENST00000489003 ABCC4O15439 1325 aa19.15■□□□□ 0.66
FDPS-213ENST00000489003 CSF1RP07333 972 aa19.14■□□□□ 0.65
FDPS-213ENST00000489003 FOXO4P98177 505 aa19.14■□□□□ 0.65
FDPS-213ENST00000489003 CCDC85AQ96PX6 553 aaPredicted RBP19.14■□□□□ 0.65
FDPS-213ENST00000489003 BBOX1O75936 387 aa19.13■□□□□ 0.65
FDPS-213ENST00000489003 CCDC152Q4G0S7 254 aa19.13■□□□□ 0.65
FDPS-213ENST00000489003 EPHA10Q5JZY3 1008 aa19.13■□□□□ 0.65
FDPS-213ENST00000489003 KAZALD1Q96I82 304 aa19.13■□□□□ 0.65
FDPS-213ENST00000489003 SEC31BQ9NQW1 1179 aa19.13■□□□□ 0.65
FDPS-213ENST00000489003 MYH3P11055 1940 aa19.12■□□□□ 0.65
FDPS-213ENST00000489003 CTSWP56202 376 aa19.12■□□□□ 0.65
FDPS-213ENST00000489003 GRAPQ13588 217 aa19.12■□□□□ 0.65
FDPS-213ENST00000489003 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
FDPS-213ENST00000489003 GRAPLQ8TC17 118 aaPredicted RBP19.12■□□□□ 0.65
FDPS-213ENST00000489003 CELF1Q92879 486 aaKnown RBP19.12■□□□□ 0.65
FDPS-213ENST00000489003 SUCLG2Q96I99 432 aa19.12■□□□□ 0.65
FDPS-213ENST00000489003 DZIP1LQ8IYY4 767 aaKnown RBP19.11■□□□□ 0.65
FDPS-213ENST00000489003 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
FDPS-213ENST00000489003 GREM2Q9H772 168 aa19.11■□□□□ 0.65
FDPS-213ENST00000489003 PLIN1O60240 522 aa19.1■□□□□ 0.65
FDPS-213ENST00000489003 RLBP1P12271 317 aa19.1■□□□□ 0.65
FDPS-213ENST00000489003 RPS8P62241 208 aaKnown RBP19.1■□□□□ 0.65
FDPS-213ENST00000489003 PPEF1O14829 653 aaPredicted RBP19.09■□□□□ 0.65
FDPS-213ENST00000489003 LMBR1LQ6UX01 489 aa19.09■□□□□ 0.65
FDPS-213ENST00000489003 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
FDPS-213ENST00000489003 SP8Q8IXZ3 490 aa19.09■□□□□ 0.65
FDPS-213ENST00000489003 ATP6V0A2Q9Y487 856 aa19.09■□□□□ 0.65
FDPS-213ENST00000489003 COL4A1P02462 1669 aa19.08■□□□□ 0.65
FDPS-213ENST00000489003 SOGA3Q5TF21 947 aa19.08■□□□□ 0.64
FDPS-213ENST00000489003 RTL9Q8NET4 1388 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 PANK1Q8TE04 598 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 MEIS3Q99687 375 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
FDPS-213ENST00000489003 GOLGB1Q14789 3259 aaKnown RBP19.06■□□□□ 0.64
FDPS-213ENST00000489003 CHD4Q14839 1912 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 NFKBIEO00221 500 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 ITGA6P23229 1130 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 FAM161AQ3B820 660 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 TMC4Q7Z404 712 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 FTSJ3Q8IY81 847 aaKnown RBP19.06■□□□□ 0.64
FDPS-213ENST00000489003 RTKN2Q8IZC4 609 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 ANKRD44Q8N8A2 993 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 BICC1Q9H694 974 aaKnown RBP19.06■□□□□ 0.64
FDPS-213ENST00000489003 CHMP3Q9Y3E7 222 aa19.06■□□□□ 0.64
FDPS-213ENST00000489003 SBF1O95248 1867 aa19.05■□□□□ 0.64
FDPS-213ENST00000489003 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
FDPS-213ENST00000489003 UBTFL1P0CB47 393 aaPredicted RBP19.05■□□□□ 0.64
FDPS-213ENST00000489003 MS4A1P11836 297 aa19.05■□□□□ 0.64
FDPS-213ENST00000489003 PRELPP51888 382 aa19.05■□□□□ 0.64
FDPS-213ENST00000489003 RABL6Q3YEC7 729 aaPredicted RBP19.05■□□□□ 0.64
FDPS-213ENST00000489003 ANKRD18AQ8IVF6 992 aa19.05■□□□□ 0.64
FDPS-213ENST00000489003 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
FDPS-213ENST00000489003 GNAI3P08754 354 aa19.04■□□□□ 0.64
FDPS-213ENST00000489003 RASSF7Q02833 373 aa19.04■□□□□ 0.64
FDPS-213ENST00000489003 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.04■□□□□ 0.64
FDPS-213ENST00000489003 CDC5LQ99459 802 aaKnown RBP19.04■□□□□ 0.64
FDPS-213ENST00000489003 HDAC5Q9UQL6 1122 aa19.04■□□□□ 0.64
FDPS-213ENST00000489003 ZBTB7BO15156 539 aaPredicted RBP19.03■□□□□ 0.64
FDPS-213ENST00000489003 IFIT5Q13325 482 aaKnown RBP19.03■□□□□ 0.64
FDPS-213ENST00000489003 GRIPAP1Q4V328 841 aa19.03■□□□□ 0.64
FDPS-213ENST00000489003 TMX4Q9H1E5 349 aaPredicted RBP19.03■□□□□ 0.64
FDPS-213ENST00000489003 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
FDPS-213ENST00000489003 SNED1Q8TER0 1413 aa19.02■□□□□ 0.64
FDPS-213ENST00000489003 FKBP4Q02790 459 aaKnown RBP eCLIP19.02■□□□□ 0.64
FDPS-213ENST00000489003 C20orf194Q5TEA3 1177 aa19.02■□□□□ 0.64
FDPS-213ENST00000489003 ITPRIPQ8IWB1 547 aa19.02■□□□□ 0.64
FDPS-213ENST00000489003 MPNDQ8N594 471 aa19.02■□□□□ 0.64
FDPS-213ENST00000489003 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
FDPS-213ENST00000489003 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
FDPS-213ENST00000489003 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
FDPS-213ENST00000489003 LTBP3Q9NS15 1303 aa19.01■□□□□ 0.63
FDPS-213ENST00000489003 IGHMBP2P38935 993 aaKnown RBP19.01■□□□□ 0.63
FDPS-213ENST00000489003 PDE3AQ14432 1141 aa19.01■□□□□ 0.63
FDPS-213ENST00000489003 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
FDPS-213ENST00000489003 C9orf131Q5VYM1 1079 aa19.01■□□□□ 0.63
FDPS-213ENST00000489003 NSFL1CQ9UNZ2 370 aaKnown RBP19.01■□□□□ 0.63
FDPS-213ENST00000489003 UTRNP46939 3433 aa19.01■□□□□ 0.63
FDPS-213ENST00000489003 LMNB1P20700 586 aa19■□□□□ 0.63
FDPS-213ENST00000489003 GPSM2P81274 684 aa19■□□□□ 0.63
FDPS-213ENST00000489003 PSMD1Q99460 953 aa19■□□□□ 0.63
FDPS-213ENST00000489003 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
FDPS-213ENST00000489003 COG6Q9Y2V7 657 aa19■□□□□ 0.63
FDPS-213ENST00000489003 GNAI2P04899 355 aa18.99■□□□□ 0.63
FDPS-213ENST00000489003 MVPQ14764 893 aaKnown RBP18.99■□□□□ 0.63
FDPS-213ENST00000489003 DPP8Q6V1X1 898 aaPredicted RBP18.99■□□□□ 0.63
FDPS-213ENST00000489003 MPHOSPH8Q99549 860 aa18.99■□□□□ 0.63
FDPS-213ENST00000489003 RTFDC1Q9BY42 306 aaPredicted RBP18.99■□□□□ 0.63
FDPS-213ENST00000489003 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
FDPS-213ENST00000489003 SPEF2Q9C093 1822 aa18.98■□□□□ 0.63
FDPS-213ENST00000489003 RFX5P48382 616 aaPredicted RBP18.98■□□□□ 0.63
FDPS-213ENST00000489003 RNF181Q9P0P0 153 aa18.98■□□□□ 0.63
FDPS-213ENST00000489003 LRRC37AA6NMS7 1700 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms