RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 MMP10P09238 476 aa19.93■□□□□ 0.78
CLDN11-208ENST00000488989 GTF2E1P29083 439 aaPredicted RBP19.93■□□□□ 0.78
CLDN11-208ENST00000488989 SF3B3Q15393 1217 aaKnown RBP19.93■□□□□ 0.78
CLDN11-208ENST00000488989 COPRSQ9NQ92 184 aa19.92■□□□□ 0.78
CLDN11-208ENST00000488989 PTPN12Q05209 780 aaKnown RBP19.91■□□□□ 0.78
CLDN11-208ENST00000488989 MSL1Q68DK7 614 aa19.91■□□□□ 0.78
CLDN11-208ENST00000488989 PARP3Q9Y6F1 533 aa19.91■□□□□ 0.78
CLDN11-208ENST00000488989 ST5P78524 1137 aa19.9■□□□□ 0.78
CLDN11-208ENST00000488989 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
CLDN11-208ENST00000488989 NLRP3Q96P20 1036 aa19.9■□□□□ 0.78
CLDN11-208ENST00000488989 LRP5O75197 1615 aa19.9■□□□□ 0.78
CLDN11-208ENST00000488989 R3HDM1Q15032 1099 aaKnown RBP19.89■□□□□ 0.77
CLDN11-208ENST00000488989 CCDC57Q2TAC2 916 aa19.89■□□□□ 0.77
CLDN11-208ENST00000488989 CCDC152Q4G0S7 254 aa19.89■□□□□ 0.77
CLDN11-208ENST00000488989 C3orf67Q6ZVT6 689 aa19.89■□□□□ 0.77
CLDN11-208ENST00000488989 GREM2Q9H772 168 aa19.89■□□□□ 0.77
CLDN11-208ENST00000488989 TAF1P21675 1872 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 KLRG2A4D1S0 409 aaPredicted RBP19.88■□□□□ 0.77
CLDN11-208ENST00000488989 RAB11FIP3O75154 756 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 IFIT5Q13325 482 aaKnown RBP19.88■□□□□ 0.77
CLDN11-208ENST00000488989 HSP90AB4PQ58FF6 505 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 FBXO3Q9UK99 471 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 PA2G4Q9UQ80 394 aaKnown RBP19.88■□□□□ 0.77
CLDN11-208ENST00000488989 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
CLDN11-208ENST00000488989 ANKRD18BA2A2Z9 1011 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 NPHP1O15259 732 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 SURF6O75683 361 aaKnown RBP19.87■□□□□ 0.77
CLDN11-208ENST00000488989 ITGA6P23229 1130 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 CRY2Q49AN0 593 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 MTFR1LQ9H019 292 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 SPEF2Q9C093 1822 aa19.87■□□□□ 0.77
CLDN11-208ENST00000488989 NUCB1Q02818 461 aa19.86■□□□□ 0.77
CLDN11-208ENST00000488989 CCDC24Q8N4L8 307 aa19.86■□□□□ 0.77
CLDN11-208ENST00000488989 BRIP1Q9BX63 1249 aa19.86■□□□□ 0.77
CLDN11-208ENST00000488989 CIAO1O76071 339 aa19.85■□□□□ 0.77
CLDN11-208ENST00000488989 KLHDC4Q8TBB5 520 aa19.85■□□□□ 0.77
CLDN11-208ENST00000488989 CCDC85AQ96PX6 553 aaPredicted RBP19.85■□□□□ 0.77
CLDN11-208ENST00000488989 PDZRN3Q9UPQ7 1066 aa19.85■□□□□ 0.77
CLDN11-208ENST00000488989 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLDN11-208ENST00000488989 ERC1Q8IUD2 1116 aa19.84■□□□□ 0.77
CLDN11-208ENST00000488989 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
CLDN11-208ENST00000488989 COL4A1P02462 1669 aa19.84■□□□□ 0.77
CLDN11-208ENST00000488989 A0A1B0GUL6 1792 aa19.83■□□□□ 0.77
CLDN11-208ENST00000488989 EYA2O00167 538 aa19.83■□□□□ 0.77
CLDN11-208ENST00000488989 ATG9AQ7Z3C6 839 aa19.83■□□□□ 0.77
CLDN11-208ENST00000488989 KIF1BPQ96EK5 621 aa19.83■□□□□ 0.77
CLDN11-208ENST00000488989 ZNF594Q96JF6 807 aaPredicted RBP19.83■□□□□ 0.77
CLDN11-208ENST00000488989 SEC31BQ9NQW1 1179 aa19.83■□□□□ 0.77
CLDN11-208ENST00000488989 C10orf71Q711Q0 1435 aa19.83■□□□□ 0.76
CLDN11-208ENST00000488989 SASH1O94885 1247 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 ZBTB7AO95365 584 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 HOXA10P31260 410 aaPredicted RBP19.82■□□□□ 0.76
CLDN11-208ENST00000488989 ANKRD45Q5TZF3 282 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 RHPN1Q8TCX5 695 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 CDC5LQ99459 802 aaKnown RBP19.82■□□□□ 0.76
CLDN11-208ENST00000488989 SGIP1Q9BQI5 828 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 LRRCC1Q9C099 1032 aa19.82■□□□□ 0.76
CLDN11-208ENST00000488989 DLEC1Q9Y238 1755 aa19.81■□□□□ 0.76
CLDN11-208ENST00000488989 PSDA5PKW4 1024 aaPredicted RBP19.81■□□□□ 0.76
CLDN11-208ENST00000488989 PDE6BP35913 854 aa19.81■□□□□ 0.76
CLDN11-208ENST00000488989 IL15P40933 162 aaPredicted RBP19.81■□□□□ 0.76
CLDN11-208ENST00000488989 TAF7LQ5H9L4 462 aa19.81■□□□□ 0.76
CLDN11-208ENST00000488989 SIL1Q9H173 461 aa19.81■□□□□ 0.76
CLDN11-208ENST00000488989 RIPOR2Q9Y4F9 1068 aa19.81■□□□□ 0.76
CLDN11-208ENST00000488989 LRRC24Q50LG9 513 aa19.8■□□□□ 0.76
CLDN11-208ENST00000488989 PUS3Q9BZE2 481 aaKnown RBP19.8■□□□□ 0.76
CLDN11-208ENST00000488989 IGHMBP2P38935 993 aaKnown RBP19.79■□□□□ 0.76
CLDN11-208ENST00000488989 OS9Q13438 667 aaPredicted RBP19.79■□□□□ 0.76
CLDN11-208ENST00000488989 LDHAL6AQ6ZMR3 332 aa19.79■□□□□ 0.76
CLDN11-208ENST00000488989 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
CLDN11-208ENST00000488989 SRGNP10124 158 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 POLD1P28340 1107 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 GRAPQ13588 217 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 ANKRD18AQ8IVF6 992 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 GRAPLQ8TC17 118 aaPredicted RBP19.78■□□□□ 0.76
CLDN11-208ENST00000488989 CELF1Q92879 486 aaKnown RBP19.78■□□□□ 0.76
CLDN11-208ENST00000488989 CRAMP1Q96RY5 1269 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 LNPKQ9C0E8 428 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 ATF5Q9Y2D1 282 aaPredicted RBP19.78■□□□□ 0.76
CLDN11-208ENST00000488989 KIAA1551Q9HCM1 1747 aa19.78■□□□□ 0.76
CLDN11-208ENST00000488989 APBB1O00213 710 aa19.77■□□□□ 0.76
CLDN11-208ENST00000488989 SMARCA5O60264 1052 aaPredicted RBP19.77■□□□□ 0.76
CLDN11-208ENST00000488989 PDE4AP27815 886 aa19.77■□□□□ 0.76
CLDN11-208ENST00000488989 RPS8P62241 208 aaKnown RBP19.77■□□□□ 0.76
CLDN11-208ENST00000488989 RPGRQ92834 1020 aaKnown RBP19.77■□□□□ 0.76
CLDN11-208ENST00000488989 RBM17Q96I25 401 aaKnown RBP19.77■□□□□ 0.76
CLDN11-208ENST00000488989 GPR108Q9NPR9 543 aa19.77■□□□□ 0.76
CLDN11-208ENST00000488989 BSDC1Q9NW68 430 aaPredicted RBP19.77■□□□□ 0.76
CLDN11-208ENST00000488989 LRRC37AA6NMS7 1700 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 NPR1P16066 1061 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 PTGER2P43116 358 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 MPHOSPH8Q99549 860 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 CNNM1Q9NRU3 951 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 ZBTB47Q9UFB7 747 aaPredicted RBP19.76■□□□□ 0.75
CLDN11-208ENST00000488989 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
CLDN11-208ENST00000488989 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
CLDN11-208ENST00000488989 TFCP2Q12800 502 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms