RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
RPL13A-212ENST00000488946 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
RPL13A-212ENST00000488946 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
RPL13A-212ENST00000488946 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
RPL13A-212ENST00000488946 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
RPL13A-212ENST00000488946 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
RPL13A-212ENST00000488946 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
RPL13A-212ENST00000488946 LSG1Q9H089 658 aaKnown RBP17.1■□□□□ 0.33
RPL13A-212ENST00000488946 TLR7Q9NYK1 1049 aaKnown RBP17.1■□□□□ 0.33
RPL13A-212ENST00000488946 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
RPL13A-212ENST00000488946 ZBTB3Q9H5J0 574 aa17.09■□□□□ 0.33
RPL13A-212ENST00000488946 MCM2P49736 904 aa17.09■□□□□ 0.33
RPL13A-212ENST00000488946 DMTNQ08495 405 aa17.09■□□□□ 0.33
RPL13A-212ENST00000488946 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
RPL13A-212ENST00000488946 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.33
RPL13A-212ENST00000488946 CCDC8Q9H0W5 538 aaPredicted RBP17.08■□□□□ 0.33
RPL13A-212ENST00000488946 SSFA2P28290 1259 aa17.08■□□□□ 0.32
RPL13A-212ENST00000488946 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
RPL13A-212ENST00000488946 LMBR1LQ6UX01 489 aa17.08■□□□□ 0.32
RPL13A-212ENST00000488946 RUFY2Q8WXA3 655 aa17.08■□□□□ 0.32
RPL13A-212ENST00000488946 DIAPH3Q9NSV4 1193 aa17.08■□□□□ 0.32
RPL13A-212ENST00000488946 EXOC5O00471 708 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 STARD3NLO95772 234 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 DDB1Q16531 1140 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 TNNI3KQ59H18 835 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 FPGT-TNNI3KV9GXZ4 949 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
RPL13A-212ENST00000488946 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
RPL13A-212ENST00000488946 HIP1O00291 1037 aa17.06■□□□□ 0.32
RPL13A-212ENST00000488946 OFD1O75665 1012 aa17.06■□□□□ 0.32
RPL13A-212ENST00000488946 NEK4P51957 841 aa17.06■□□□□ 0.32
RPL13A-212ENST00000488946 CWC27Q6UX04 472 aaKnown RBP17.06■□□□□ 0.32
RPL13A-212ENST00000488946 RREB1Q92766 1687 aa17.06■□□□□ 0.32
RPL13A-212ENST00000488946 CCDC173Q0VFZ6 552 aa17.05■□□□□ 0.32
RPL13A-212ENST00000488946 TFCP2Q12800 502 aa17.05■□□□□ 0.32
RPL13A-212ENST00000488946 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
RPL13A-212ENST00000488946 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
RPL13A-212ENST00000488946 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
RPL13A-212ENST00000488946 PPP1R9BQ96SB3 815 aa17.05■□□□□ 0.32
RPL13A-212ENST00000488946 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
RPL13A-212ENST00000488946 ATP5JP18859 108 aa17.04■□□□□ 0.32
RPL13A-212ENST00000488946 KLHL40Q2TBA0 621 aa17.04■□□□□ 0.32
RPL13A-212ENST00000488946 KIF6Q6ZMV9 814 aa17.04■□□□□ 0.32
RPL13A-212ENST00000488946 MAP3K15Q6ZN16 1313 aa17.04■□□□□ 0.32
RPL13A-212ENST00000488946 CYP2E1P05181 493 aaPredicted RBP17.04■□□□□ 0.32
RPL13A-212ENST00000488946 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
RPL13A-212ENST00000488946 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
RPL13A-212ENST00000488946 BAG4O95429 457 aaKnown RBP17.03■□□□□ 0.32
RPL13A-212ENST00000488946 NASPP49321 788 aaPredicted RBP17.03■□□□□ 0.32
RPL13A-212ENST00000488946 CUL4AQ13619 759 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 MTERF4Q7Z6M4 381 aaKnown RBP17.03■□□□□ 0.32
RPL13A-212ENST00000488946 KCNB2Q92953 911 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 SNX14Q9Y5W7 946 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 ZNF609O15014 1411 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 MED23Q9ULK4 1368 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
RPL13A-212ENST00000488946 CIAO1O76071 339 aa17.02■□□□□ 0.32
RPL13A-212ENST00000488946 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.32
RPL13A-212ENST00000488946 NUCB2P80303 420 aa17.02■□□□□ 0.32
RPL13A-212ENST00000488946 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
RPL13A-212ENST00000488946 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.32
RPL13A-212ENST00000488946 DDX49Q9Y6V7 483 aaKnown RBP17.02■□□□□ 0.32
RPL13A-212ENST00000488946 NUP98P52948 1817 aa17.02■□□□□ 0.31
RPL13A-212ENST00000488946 IL15P40933 162 aaPredicted RBP17.02■□□□□ 0.31
RPL13A-212ENST00000488946 GIGYF2Q6Y7W6 1299 aaKnown RBP17.02■□□□□ 0.31
RPL13A-212ENST00000488946 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
RPL13A-212ENST00000488946 CCDC171Q6TFL3 1326 aa17.01■□□□□ 0.31
RPL13A-212ENST00000488946 PAXIP1Q6ZW49 1069 aaPredicted RBP17.01■□□□□ 0.31
RPL13A-212ENST00000488946 TMEM51Q9NW97 253 aa17.01■□□□□ 0.31
RPL13A-212ENST00000488946 CDHR2Q9BYE9 1310 aa17.01■□□□□ 0.31
RPL13A-212ENST00000488946 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
RPL13A-212ENST00000488946 PPP4R3BQ5MIZ7 849 aa17.01■□□□□ 0.31
RPL13A-212ENST00000488946 MYH3P11055 1940 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 EYA2O00167 538 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 FAM196AQ6ZSG2 479 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
RPL13A-212ENST00000488946 DBNDD2Q9BQY9 259 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 FSD1Q9BTV5 496 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
RPL13A-212ENST00000488946 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 PTH1RQ03431 593 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 ZBTB38Q8NAP3 1195 aaPredicted RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 TTC14Q96N46 770 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 ZNF831Q5JPB2 1677 aa16.99■□□□□ 0.31
RPL13A-212ENST00000488946 ZSCAN20P17040 1043 aaPredicted RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 MARCH10Q8NA82 808 aaPredicted RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
RPL13A-212ENST00000488946 FAM227BQ96M60 508 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms