RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FAM161AQ3B820 660 aa15.39■□□□□ 0.05
TRAIP-209ENST00000488860 SLC10A5Q5PT55 438 aa15.39■□□□□ 0.05
TRAIP-209ENST00000488860 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
TRAIP-209ENST00000488860 SGIP1Q9BQI5 828 aa15.39■□□□□ 0.05
TRAIP-209ENST00000488860 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
TRAIP-209ENST00000488860 COL4A1P02462 1669 aa15.38■□□□□ 0.05
TRAIP-209ENST00000488860 CCDC152Q4G0S7 254 aa15.38■□□□□ 0.05
TRAIP-209ENST00000488860 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
TRAIP-209ENST00000488860 BRIP1Q9BX63 1249 aa15.38■□□□□ 0.05
TRAIP-209ENST00000488860 SRGAP3O43295 1099 aa15.37■□□□□ 0.05
TRAIP-209ENST00000488860 PDE6BP35913 854 aa15.37■□□□□ 0.05
TRAIP-209ENST00000488860 AAMPQ13685 434 aa15.37■□□□□ 0.05
TRAIP-209ENST00000488860 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
TRAIP-209ENST00000488860 TTLL11Q8NHH1 800 aa15.37■□□□□ 0.05
TRAIP-209ENST00000488860 GREM2Q9H772 168 aa15.37■□□□□ 0.05
TRAIP-209ENST00000488860 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
TRAIP-209ENST00000488860 TAF7LQ5H9L4 462 aa15.36■□□□□ 0.05
TRAIP-209ENST00000488860 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
TRAIP-209ENST00000488860 PCDHB15Q9Y5E8 787 aa15.36■□□□□ 0.05
TRAIP-209ENST00000488860 CSF1RP07333 972 aa15.35■□□□□ 0.05
TRAIP-209ENST00000488860 ITGA6P23229 1130 aa15.35■□□□□ 0.05
TRAIP-209ENST00000488860 CHRNA5P30532 468 aa15.35■□□□□ 0.05
TRAIP-209ENST00000488860 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
TRAIP-209ENST00000488860 CCDC57Q2TAC2 916 aa15.35■□□□□ 0.05
TRAIP-209ENST00000488860 SLX4Q8IY92 1834 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 ANKRD18BA2A2Z9 1011 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 H0YIN7 160 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 HMMRO75330 724 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 ATP8B2P98198 1209 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 IFIT5Q13325 482 aaKnown RBP15.34■□□□□ 0.05
TRAIP-209ENST00000488860 MTX1Q13505 466 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
TRAIP-209ENST00000488860 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
TRAIP-209ENST00000488860 ZNF622Q969S3 477 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAIP-209ENST00000488860 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
TRAIP-209ENST00000488860 SEC31BQ9NQW1 1179 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 RTL9Q8NET4 1388 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 LRRC37AA6NMS7 1700 aa15.34■□□□□ 0.05
TRAIP-209ENST00000488860 CRY2Q49AN0 593 aa15.33■□□□□ 0.04
TRAIP-209ENST00000488860 SIRT2Q8IXJ6 389 aa15.33■□□□□ 0.04
TRAIP-209ENST00000488860 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
TRAIP-209ENST00000488860 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
TRAIP-209ENST00000488860 SRGNP10124 158 aa15.32■□□□□ 0.04
TRAIP-209ENST00000488860 NPR1P16066 1061 aa15.32■□□□□ 0.04
TRAIP-209ENST00000488860 MASTLQ96GX5 879 aa15.32■□□□□ 0.04
TRAIP-209ENST00000488860 CDC5LQ99459 802 aaKnown RBP15.32■□□□□ 0.04
TRAIP-209ENST00000488860 SIL1Q9H173 461 aa15.32■□□□□ 0.04
TRAIP-209ENST00000488860 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
TRAIP-209ENST00000488860 A0A0G2JLW4 131 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 DPEP1P16444 411 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 IGHMBP2P38935 993 aaKnown RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 RFX5P48382 616 aaPredicted RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 GRAPQ13588 217 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 POLA2Q14181 598 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 ERICH6BQ5W0A0 696 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 ANKRD18AQ8IVF6 992 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 FHDC1Q9C0D6 1143 aaPredicted RBP15.31■□□□□ 0.04
TRAIP-209ENST00000488860 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 PDZRN3Q9UPQ7 1066 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 GTF3C3Q9Y5Q9 886 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 ARFGEF1Q9Y6D6 1849 aa15.31■□□□□ 0.04
TRAIP-209ENST00000488860 OS9Q13438 667 aaPredicted RBP15.3■□□□□ 0.04
TRAIP-209ENST00000488860 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
TRAIP-209ENST00000488860 APBB1O00213 710 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
TRAIP-209ENST00000488860 SURF6O75683 361 aaKnown RBP15.29■□□□□ 0.04
TRAIP-209ENST00000488860 TGFB2P61812 414 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 PTPN12Q05209 780 aaKnown RBP15.29■□□□□ 0.04
TRAIP-209ENST00000488860 STYK1Q6J9G0 422 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 MPHOSPH8Q99549 860 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
TRAIP-209ENST00000488860 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 EXOC6BQ9Y2D4 811 aa15.29■□□□□ 0.04
TRAIP-209ENST00000488860 HOXA10P31260 410 aaPredicted RBP15.28■□□□□ 0.04
TRAIP-209ENST00000488860 HDAC1Q13547 482 aaPredicted RBP15.28■□□□□ 0.04
TRAIP-209ENST00000488860 CRAMP1Q96RY5 1269 aa15.28■□□□□ 0.04
TRAIP-209ENST00000488860 ARAP2Q8WZ64 1704 aa15.28■□□□□ 0.04
TRAIP-209ENST00000488860 IGHDP01880 384 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 ALDH1B1P30837 517 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.04
TRAIP-209ENST00000488860 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAIP-209ENST00000488860 LRRC24Q50LG9 513 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.04
TRAIP-209ENST00000488860 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 CNKSR1Q969H4 720 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 PUS3Q9BZE2 481 aaKnown RBP15.27■□□□□ 0.04
TRAIP-209ENST00000488860 BCL11AQ9H165 835 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 COPRSQ9NQ92 184 aa15.27■□□□□ 0.04
TRAIP-209ENST00000488860 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
TRAIP-209ENST00000488860 EYA2O00167 538 aa15.26■□□□□ 0.03
TRAIP-209ENST00000488860 SLC51AQ86UW1 340 aa15.26■□□□□ 0.03
TRAIP-209ENST00000488860 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms