RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
PTCH1-211ENST00000488809 ABCC4O15439 1325 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 TNRC18O15417 2968 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 BBOX1O75936 387 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 GMPSP49915 693 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 TTLL7Q6ZT98 887 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 TMC4Q7Z404 712 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 MPNDQ8N594 471 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 RTFDC1Q9BY42 306 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 GLIS2Q9BZE0 524 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 PNNQ9H307 717 aaKnown RBP8.59□□□□□ -1.03
PTCH1-211ENST00000488809 TAF1P21675 1872 aa8.59□□□□□ -1.03
PTCH1-211ENST00000488809 HUNKP57058 714 aa8.58□□□□□ -1.04
PTCH1-211ENST00000488809 EIF4A1P60842 406 aaKnown RBP8.58□□□□□ -1.04
PTCH1-211ENST00000488809 KIAA2012Q0VF49 1180 aa8.58□□□□□ -1.04
PTCH1-211ENST00000488809 DDX46Q7L014 1031 aaKnown RBP8.58□□□□□ -1.04
PTCH1-211ENST00000488809 SP8Q8IXZ3 490 aa8.58□□□□□ -1.04
PTCH1-211ENST00000488809 SAGE1Q9NXZ1 904 aa8.58□□□□□ -1.04
PTCH1-211ENST00000488809 MIS18AQ9NYP9 233 aa8.58□□□□□ -1.04
PTCH1-211ENST00000488809 MAPK8IP3Q9UPT6 1336 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 RAD17O75943 681 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 SLC10A5Q5PT55 438 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 C2orf69Q8N8R5 385 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 CNOT7Q9UIV1 285 aaKnown RBP8.57□□□□□ -1.04
PTCH1-211ENST00000488809 PSME4Q14997 1843 aa8.57□□□□□ -1.04
PTCH1-211ENST00000488809 RPS12P25398 132 aaKnown RBP8.56□□□□□ -1.04
PTCH1-211ENST00000488809 GRAPQ13588 217 aa8.56□□□□□ -1.04
PTCH1-211ENST00000488809 RGMBQ6NW40 437 aa8.56□□□□□ -1.04
PTCH1-211ENST00000488809 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
PTCH1-211ENST00000488809 REM2Q8IYK8 340 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-211ENST00000488809 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-211ENST00000488809 DPF2Q92785 391 aa8.56□□□□□ -1.04
PTCH1-211ENST00000488809 DCPSQ96C86 337 aaKnown RBP8.56□□□□□ -1.04
PTCH1-211ENST00000488809 GBA2Q9HCG7 927 aaPredicted RBP8.56□□□□□ -1.04
PTCH1-211ENST00000488809 SH3TC1Q8TE82 1336 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 HIRAP54198 1017 aaPredicted RBP8.55□□□□□ -1.04
PTCH1-211ENST00000488809 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 WASHC4Q2M389 1173 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 KRT26Q7Z3Y9 468 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 USP48Q86UV5 1035 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 TRPM4Q8TD43 1214 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 EYA3Q99504 573 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 TRMT112Q9UI30 125 aaKnown RBP8.55□□□□□ -1.04
PTCH1-211ENST00000488809 TSPYL4Q9UJ04 414 aa8.55□□□□□ -1.04
PTCH1-211ENST00000488809 DUOX1Q9NRD9 1551 aa8.54□□□□□ -1.04
PTCH1-211ENST00000488809 EIF2S2P20042 333 aaKnown RBP8.54□□□□□ -1.04
PTCH1-211ENST00000488809 ZNF157P51786 506 aaPredicted RBP8.54□□□□□ -1.04
PTCH1-211ENST00000488809 SULF1Q8IWU6 871 aa8.54□□□□□ -1.04
PTCH1-211ENST00000488809 BABAM1Q9NWV8 329 aa8.54□□□□□ -1.04
PTCH1-211ENST00000488809 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 YDJCA8MPS7 323 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 G3V3G9 751 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 PSMD14O00487 310 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 HCLS1P14317 486 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 LMOD3Q0VAK6 560 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 PKN2Q16513 984 aaKnown RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 TBC1D10BQ4KMP7 808 aaPredicted RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 DCAF8Q5TAQ9 597 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 CTU1Q7Z7A3 348 aaKnown RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 NLRP10Q86W26 655 aa8.53□□□□□ -1.04
PTCH1-211ENST00000488809 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
PTCH1-211ENST00000488809 SCN9AQ15858 1988 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 FAM155AB1AL88 458 aaPredicted RBP8.52□□□□□ -1.05
PTCH1-211ENST00000488809 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 TRPA1O75762 1119 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 SLC10A3P09131 477 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
PTCH1-211ENST00000488809 SOX10P56693 466 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 AIMP1Q12904 312 aaKnown RBP8.52□□□□□ -1.05
PTCH1-211ENST00000488809 TCIRG1Q13488 830 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 PLEKHF1Q96S99 279 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 DBNDD1Q9H9R9 158 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 RNF186Q9NXI6 227 aa8.52□□□□□ -1.05
PTCH1-211ENST00000488809 ZBTB12Q9Y330 459 aaPredicted RBP8.52□□□□□ -1.05
PTCH1-211ENST00000488809 ECE2O60344 883 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 FKBP1BP68106 108 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 PDIA6Q15084 440 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 RBM26Q5T8P6 1007 aaKnown RBP8.51□□□□□ -1.05
PTCH1-211ENST00000488809 LRP10Q7Z4F1 713 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 XAGE3Q8WTP9 111 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 ZC3H12CQ9C0D7 883 aaKnown RBP8.51□□□□□ -1.05
PTCH1-211ENST00000488809 GGA3Q9NZ52 723 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 HDAC9Q9UKV0 1011 aa8.51□□□□□ -1.05
PTCH1-211ENST00000488809 MYH3P11055 1940 aa8.5□□□□□ -1.05
PTCH1-211ENST00000488809 SHTN1A0MZ66 631 aa8.5□□□□□ -1.05
PTCH1-211ENST00000488809 ADM5C9JUS6 153 aa8.5□□□□□ -1.05
PTCH1-211ENST00000488809 RIMBP2O15034 1052 aa8.5□□□□□ -1.05
PTCH1-211ENST00000488809 ANXA1P04083 346 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms