RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 RGL2O15211 777 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 PARP10Q53GL7 1025 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 SMIM5Q71RC9 77 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 NLRP10Q86W26 655 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 SIRT2Q8IXJ6 389 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 GCC1Q96CN9 775 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 SUCLG2Q96I99 432 aa9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
APOBEC3A-203ENST00000488758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 PCCAP05165 728 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 SSFA2P28290 1259 aa9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 PPP1R42Q7Z4L9 355 aa9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 ZBTB38Q8NAP3 1195 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 CAMKK2Q96RR4 588 aa9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 TFCP2L1Q9NZI6 479 aa9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 TRMT112Q9UI30 125 aaKnown RBP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 NIP7Q9Y221 180 aaKnown RBP eCLIP9.41□□□□□ -0.9
APOBEC3A-203ENST00000488758 NUP98P52948 1817 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 POTEFA5A3E0 1075 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 FAM177BA6PVY3 158 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 POTEB2H3BUK9 544 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 SRGAP3O43295 1099 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 ANKRD45Q5TZF3 282 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 SUSD4Q5VX71 490 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 BICDL1Q6ZP65 573 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 FLAD1Q8NFF5 587 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 FAM89AQ96GI7 184 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 BICC1Q9H694 974 aaKnown RBP9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 SRP68Q9UHB9 627 aaKnown RBP9.4□□□□□ -0.9
APOBEC3A-203ENST00000488758 USP42Q9H9J4 1324 aaKnown RBP9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 HSP90B1P14625 803 aaKnown RBP9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 GTF2E1P29083 439 aaPredicted RBP9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 CASP7P55210 303 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 AMIGO3Q86WK7 504 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 SSH3Q8TE77 659 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 STK32BQ9NY57 414 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
APOBEC3A-203ENST00000488758 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 SH3TC1Q8TE82 1336 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 CDHR2Q9BYE9 1310 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 IRS4O14654 1257 aaPredicted RBP9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 SURF6O75683 361 aaKnown RBP9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 SEC24BO95487 1268 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 MTX1Q13505 466 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 ZNF827Q17R98 1081 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 HSP90AB4PQ58FF6 505 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 EPHA10Q5JZY3 1008 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 LMBR1LQ6UX01 489 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 KAZALD1Q96I82 304 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 NYXQ9GZU5 481 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 PDZRN3Q9UPQ7 1066 aa9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 COLQQ9Y215 455 aaPredicted RBP9.38□□□□□ -0.91
APOBEC3A-203ENST00000488758 RGPD3A6NKT7 1758 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 ANKRD36CQ5JPF3 1778 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 APBB1O00213 710 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 NPHP1O15259 732 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 PDE8AO60658 829 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 RAB11FIP3O75154 756 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 FOXO4P98177 505 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 RABL6Q3YEC7 729 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 TPTE2Q6XPS3 522 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 COL23A1Q86Y22 540 aaPredicted RBP9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
APOBEC3A-203ENST00000488758 NTSR2O95665 410 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 GYS1P13807 737 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 IRX5P78411 483 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 NUCB1Q02818 461 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 G3BP1Q13283 466 aaKnown RBP eCLIP9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 SLC15A2Q16348 729 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 CHD1LQ86WJ1 897 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 NBPF5PQ86XG9 351 aaPredicted RBP9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 NLGN1Q8N2Q7 840 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 BCORQ6W2J9 1755 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
APOBEC3A-203ENST00000488758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 CSF1RP07333 972 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 HCLS1P14317 486 aaPredicted RBP9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 PLCG2P16885 1265 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 RGS3P49796 1198 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 NFIXQ14938 502 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 NUTM1Q86Y26 1132 aa9.35□□□□□ -0.91
APOBEC3A-203ENST00000488758 ERC1Q8IUD2 1116 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms