RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 PYGBP11216 843 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 SNX1Q13596 522 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 CC2D1AQ6P1N0 951 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 SYAP1Q96A49 352 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 RBM47A0AV96 593 aaKnown RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 CCP110O43303 1012 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 ARMC3Q5W041 872 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 OR8K1Q8NGG5 319 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 JPH2Q9BR39 696 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 YIPF2Q9BWQ6 316 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 TMX4Q9H1E5 349 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 HOMER3Q9NSC5 361 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 TNNQ9UQP3 1299 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 AKAP2Q9Y2D5 859 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 RTL1A6NKG5 1358 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 PPFIA4O75335 1185 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 LMAN1P49257 510 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 RBBP5Q15291 538 aaKnown RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
SIK3-212ENST00000488337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 RPAP1Q9BWH6 1393 aaPredicted RBP7.39□□□□□ -1.23
SIK3-212ENST00000488337 EXOC5O00471 708 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 ECM2O94769 699 aaPredicted RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 ERLIN2O94905 339 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 LNPKQ9C0E8 428 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 SYNRGQ9UMZ2 1314 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 SETSIPP0DME0 302 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 PAX3P23760 479 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 EIF2AK4Q9P2K8 1649 aaKnown RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 BMP2KLQ5H9B9 411 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 CCDC183Q5T5S1 534 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 ACRBPQ8NEB7 543 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 BICD2Q8TD16 824 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 TCP11Q8WWU5 503 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 TSR2Q969E8 191 aaKnown RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 TSPYL2Q9H2G4 693 aaPredicted RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 RTEL1Q9NZ71 1219 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 EXOSC9Q06265 439 aaKnown RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 HHATQ5VTY9 493 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 TMCO3Q6UWJ1 677 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 RPUSD2Q8IZ73 545 aaKnown RBP7.38□□□□□ -1.23
SIK3-212ENST00000488337 PRAM1Q96QH2 718 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 CRACR2AQ9BSW2 395 aa7.38□□□□□ -1.23
SIK3-212ENST00000488337 FBXW10Q5XX13 1052 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 RCSD1Q6JBY9 416 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 CACTINQ8WUQ7 758 aaKnown RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 TRPM1Q7Z4N2 1603 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 GADD45BO75293 160 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 MX1P20591 662 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 CDC25BP30305 580 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 SLC8A3P57103 927 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 MAP3K9P80192 1104 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 ZBED6P86452 979 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 SAFB2Q14151 953 aaKnown RBP eCLIP7.37□□□□□ -1.23
SIK3-212ENST00000488337 CCDC158Q5M9N0 1113 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 SPATA21Q7Z572 469 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 FILIP1Q7Z7B0 1213 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 AMOTL1Q8IY63 956 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 FAM177A1Q8N128 213 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 ZGPATQ8N5A5 531 aaKnown RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 FAM107BQ9H098 131 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 RMI1Q9H9A7 625 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 KIF9Q9HAQ2 790 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 POLR3AO14802 1390 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 TADA3O75528 432 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 SEC31AO94979 1220 aaKnown RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 CASTP20810 708 aaKnown RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 FOXD4L6Q3SYB3 417 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 ARHGAP29Q52LW3 1261 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 FOXD4L3Q6VB84 417 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 ATF7IPQ6VMQ6 1270 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 ANKRD18AQ8IVF6 992 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 MAGEC3Q8TD91 643 aa7.37□□□□□ -1.23
SIK3-212ENST00000488337 CWC25Q9NXE8 425 aaPredicted RBP7.37□□□□□ -1.23
SIK3-212ENST00000488337 TUBGCP6Q96RT7 1819 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 TSNAXIP1Q2TAA8 658 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 SYNPO2Q9UMS6 1093 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 YTHDC2Q9H6S0 1430 aaKnown RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 ANKRD65E5RJM6 399 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 PDLIM1O00151 329 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 ERC2O15083 957 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 CHUKO15111 745 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 CCDC15Q0P6D6 951 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 MYLK4Q86YV6 388 aaPredicted RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 NRBP1Q9UHY1 535 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 U3KPZ7 1027 aaPredicted RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 SYCP2Q9BX26 1530 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 SHOX2O60902 331 aaPredicted RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 EZH1Q92800 747 aaPredicted RBP7.36□□□□□ -1.23
SIK3-212ENST00000488337 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
SIK3-212ENST00000488337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms