RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
GABBR1-215ENST00000488334 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
GABBR1-215ENST00000488334 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
GABBR1-215ENST00000488334 LAMB2P55268 1798 aa18.19■□□□□ 0.5
GABBR1-215ENST00000488334 GRAPQ13588 217 aa18.19■□□□□ 0.5
GABBR1-215ENST00000488334 PDE3AQ14432 1141 aa18.19■□□□□ 0.5
GABBR1-215ENST00000488334 PELP1Q8IZL8 1130 aaKnown RBP18.19■□□□□ 0.5
GABBR1-215ENST00000488334 TTLL11Q8NHH1 800 aa18.19■□□□□ 0.5
GABBR1-215ENST00000488334 GRAPLQ8TC17 118 aaPredicted RBP18.19■□□□□ 0.5
GABBR1-215ENST00000488334 C3orf67Q6ZVT6 689 aa18.18■□□□□ 0.5
GABBR1-215ENST00000488334 CDC5LQ99459 802 aaKnown RBP18.18■□□□□ 0.5
GABBR1-215ENST00000488334 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
GABBR1-215ENST00000488334 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
GABBR1-215ENST00000488334 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
GABBR1-215ENST00000488334 YBX3P16989 372 aaKnown RBP eCLIP18.17■□□□□ 0.5
GABBR1-215ENST00000488334 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
GABBR1-215ENST00000488334 C7orf43Q8WVR3 580 aa18.17■□□□□ 0.5
GABBR1-215ENST00000488334 CLUAP1Q96AJ1 413 aa18.17■□□□□ 0.5
GABBR1-215ENST00000488334 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
GABBR1-215ENST00000488334 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
GABBR1-215ENST00000488334 COL11A2P13942 1736 aaPredicted RBP18.16■□□□□ 0.5
GABBR1-215ENST00000488334 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
GABBR1-215ENST00000488334 FOXO4P98177 505 aa18.16■□□□□ 0.5
GABBR1-215ENST00000488334 JARID2Q92833 1246 aaPredicted RBP18.16■□□□□ 0.5
GABBR1-215ENST00000488334 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
GABBR1-215ENST00000488334 RABL6Q3YEC7 729 aaPredicted RBP18.15■□□□□ 0.5
GABBR1-215ENST00000488334 CCDC93Q567U6 631 aa18.15■□□□□ 0.5
GABBR1-215ENST00000488334 SP8Q8IXZ3 490 aa18.15■□□□□ 0.5
GABBR1-215ENST00000488334 TMEM57Q8N5G2 664 aa18.15■□□□□ 0.5
GABBR1-215ENST00000488334 ATP6V0A2Q9Y487 856 aa18.15■□□□□ 0.5
GABBR1-215ENST00000488334 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
GABBR1-215ENST00000488334 MYH3P11055 1940 aa18.14■□□□□ 0.49
GABBR1-215ENST00000488334 IFIT5Q13325 482 aaKnown RBP18.14■□□□□ 0.49
GABBR1-215ENST00000488334 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
GABBR1-215ENST00000488334 ANKRD18BA2A2Z9 1011 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 C21orf2O43822 256 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 IGHMBP2P38935 993 aaKnown RBP18.13■□□□□ 0.49
GABBR1-215ENST00000488334 CCDC57Q2TAC2 916 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 GREM2Q9H772 168 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 DDX19BQ9UMR2 479 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
GABBR1-215ENST00000488334 GNAI2P04899 355 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 ITGA6P23229 1130 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 ARHGAP27Q6ZUM4 889 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 BSDC1Q9NW68 430 aaPredicted RBP18.12■□□□□ 0.49
GABBR1-215ENST00000488334 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
GABBR1-215ENST00000488334 CELF1Q92879 486 aaKnown RBP18.11■□□□□ 0.49
GABBR1-215ENST00000488334 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
GABBR1-215ENST00000488334 PSMD1Q99460 953 aa18.11■□□□□ 0.49
GABBR1-215ENST00000488334 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
GABBR1-215ENST00000488334 WWC3Q9ULE0 1092 aa18.11■□□□□ 0.49
GABBR1-215ENST00000488334 ZBTB7BO15156 539 aaPredicted RBP18.1■□□□□ 0.49
GABBR1-215ENST00000488334 RLBP1P12271 317 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
GABBR1-215ENST00000488334 SUPT20HQ8NEM7 779 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 MPHOSPH8Q99549 860 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 MEIS3Q99687 375 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 SEC31BQ9NQW1 1179 aa18.1■□□□□ 0.49
GABBR1-215ENST00000488334 UTRNP46939 3433 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
GABBR1-215ENST00000488334 FKBP4Q02790 459 aaKnown RBP eCLIP18.09■□□□□ 0.49
GABBR1-215ENST00000488334 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 EPHA10Q5JZY3 1008 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 FBXO3Q9UK99 471 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 CHMP3Q9Y3E7 222 aa18.09■□□□□ 0.49
GABBR1-215ENST00000488334 PLIN1O60240 522 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 MTX1Q13505 466 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 ANKRD44Q8N8A2 993 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 PANK1Q8TE04 598 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 CCDC85AQ96PX6 553 aaPredicted RBP18.08■□□□□ 0.48
GABBR1-215ENST00000488334 RTFDC1Q9BY42 306 aaPredicted RBP18.08■□□□□ 0.48
GABBR1-215ENST00000488334 PODXL2Q9NZ53 605 aa18.08■□□□□ 0.48
GABBR1-215ENST00000488334 LMNB1P20700 586 aa18.07■□□□□ 0.48
GABBR1-215ENST00000488334 DPP8Q6V1X1 898 aaPredicted RBP18.07■□□□□ 0.48
GABBR1-215ENST00000488334 MPNDQ8N594 471 aa18.07■□□□□ 0.48
GABBR1-215ENST00000488334 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
GABBR1-215ENST00000488334 LRRFIP2Q9Y608 721 aaKnown RBP18.07■□□□□ 0.48
GABBR1-215ENST00000488334 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
GABBR1-215ENST00000488334 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
GABBR1-215ENST00000488334 NFKBIEO00221 500 aa18.05■□□□□ 0.48
GABBR1-215ENST00000488334 AAMPQ13685 434 aa18.05■□□□□ 0.48
GABBR1-215ENST00000488334 LDHAL6AQ6ZMR3 332 aa18.05■□□□□ 0.48
GABBR1-215ENST00000488334 SNED1Q8TER0 1413 aa18.05■□□□□ 0.48
GABBR1-215ENST00000488334 XDHP47989 1333 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 FER1L6Q2WGJ9 1857 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 EYA3Q99504 573 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 ANKIB1Q9P2G1 1089 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 MINPP1Q9UNW1 487 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 NSFL1CQ9UNZ2 370 aaKnown RBP18.04■□□□□ 0.48
GABBR1-215ENST00000488334 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
GABBR1-215ENST00000488334 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
GABBR1-215ENST00000488334 ATP2B4P23634 1241 aa18.03■□□□□ 0.48
GABBR1-215ENST00000488334 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms