RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 FLAD1Q8NFF5 587 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.63□□□□□ -0.39
NOLC1-207ENST00000488254 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 COL4A1P02462 1669 aa12.63□□□□□ -0.39
NOLC1-207ENST00000488254 DDX60Q8IY21 1712 aaKnown RBP12.63□□□□□ -0.39
NOLC1-207ENST00000488254 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
NOLC1-207ENST00000488254 CTSWP56202 376 aa12.62□□□□□ -0.39
NOLC1-207ENST00000488254 AAMPQ13685 434 aa12.62□□□□□ -0.39
NOLC1-207ENST00000488254 NLGN1Q8N2Q7 840 aa12.62□□□□□ -0.39
NOLC1-207ENST00000488254 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
NOLC1-207ENST00000488254 PDE8AO60658 829 aa12.62□□□□□ -0.39
NOLC1-207ENST00000488254 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
NOLC1-207ENST00000488254 COL24A1Q17RW2 1714 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 POLA2Q14181 598 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
NOLC1-207ENST00000488254 MYH3P11055 1940 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
NOLC1-207ENST00000488254 PTPN12Q05209 780 aaKnown RBP12.61□□□□□ -0.39
NOLC1-207ENST00000488254 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
NOLC1-207ENST00000488254 C16orf71Q8IYS4 520 aaPredicted RBP12.61□□□□□ -0.39
NOLC1-207ENST00000488254 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 CDHR2Q9BYE9 1310 aa12.61□□□□□ -0.39
NOLC1-207ENST00000488254 ITGA6P23229 1130 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 MTX1Q13505 466 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 CASZ1Q86V15 1759 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 NYXQ9GZU5 481 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
NOLC1-207ENST00000488254 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 CSF1RP07333 972 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 RGS3P49796 1198 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
NOLC1-207ENST00000488254 HMMRO75330 724 aa12.59□□□□□ -0.39
NOLC1-207ENST00000488254 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
NOLC1-207ENST00000488254 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
NOLC1-207ENST00000488254 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
NOLC1-207ENST00000488254 PLA2G12BQ9BX93 195 aa12.59□□□□□ -0.39
NOLC1-207ENST00000488254 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
NOLC1-207ENST00000488254 OS9Q13438 667 aaPredicted RBP12.59□□□□□ -0.39
NOLC1-207ENST00000488254 OTUD7AQ8TE49 926 aaPredicted RBP12.59□□□□□ -0.39
NOLC1-207ENST00000488254 LAMB2P55268 1798 aa12.58□□□□□ -0.39
NOLC1-207ENST00000488254 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
NOLC1-207ENST00000488254 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
NOLC1-207ENST00000488254 SNAP23O00161 211 aa12.58□□□□□ -0.4
NOLC1-207ENST00000488254 RGL2O15211 777 aa12.58□□□□□ -0.4
NOLC1-207ENST00000488254 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
NOLC1-207ENST00000488254 QSER1Q2KHR3 1735 aa12.58□□□□□ -0.4
NOLC1-207ENST00000488254 SPEF2Q9C093 1822 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
NOLC1-207ENST00000488254 SASH1O94885 1247 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 TAF7LQ5H9L4 462 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
NOLC1-207ENST00000488254 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
NOLC1-207ENST00000488254 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 ST5P78524 1137 aa12.57□□□□□ -0.4
NOLC1-207ENST00000488254 PPP1R1BQ9UD71 204 aaPredicted RBP12.57□□□□□ -0.4
NOLC1-207ENST00000488254 CCDC152Q4G0S7 254 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 ANKRD31Q8N7Z5 1873 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 ANKRD18BA2A2Z9 1011 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 CHRNA5P30532 468 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 LDHAL6AQ6ZMR3 332 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 GCC1Q96CN9 775 aa12.56□□□□□ -0.4
NOLC1-207ENST00000488254 NUCB1Q02818 461 aa12.55□□□□□ -0.4
NOLC1-207ENST00000488254 TFCP2Q12800 502 aa12.55□□□□□ -0.4
NOLC1-207ENST00000488254 G3BP1Q13283 466 aaKnown RBP eCLIP12.55□□□□□ -0.48e-8■■■■□ 20.5
NOLC1-207ENST00000488254 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
NOLC1-207ENST00000488254 COPRSQ9NQ92 184 aa12.55□□□□□ -0.4
NOLC1-207ENST00000488254 SF3B3Q15393 1217 aaKnown RBP12.54□□□□□ -0.4
NOLC1-207ENST00000488254 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
NOLC1-207ENST00000488254 RHPN1Q8TCX5 695 aa12.54□□□□□ -0.4
NOLC1-207ENST00000488254 TAF5LO75529 589 aa12.54□□□□□ -0.4
NOLC1-207ENST00000488254 LRRCC1Q9C099 1032 aa12.54□□□□□ -0.4
NOLC1-207ENST00000488254 CNNM1Q9NRU3 951 aa12.54□□□□□ -0.4
NOLC1-207ENST00000488254 CCDC8Q9H0W5 538 aaPredicted RBP12.53□□□□□ -0.4
NOLC1-207ENST00000488254 TLR7Q9NYK1 1049 aaKnown RBP12.53□□□□□ -0.4
NOLC1-207ENST00000488254 EYA2O00167 538 aa12.53□□□□□ -0.4
NOLC1-207ENST00000488254 MTFR1LQ9H019 292 aa12.53□□□□□ -0.4
NOLC1-207ENST00000488254 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
NOLC1-207ENST00000488254 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
NOLC1-207ENST00000488254 TIMM10P62072 90 aa12.52□□□□□ -0.4
NOLC1-207ENST00000488254 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.4
NOLC1-207ENST00000488254 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.4
NOLC1-207ENST00000488254 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.4
NOLC1-207ENST00000488254 BRIP1Q9BX63 1249 aa12.52□□□□□ -0.4
NOLC1-207ENST00000488254 ZNF622Q969S3 477 aaKnown RBP eCLIP12.52□□□□□ -0.413e-8■□□□□ 11.3
NOLC1-207ENST00000488254 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
NOLC1-207ENST00000488254 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
NOLC1-207ENST00000488254 RIPOR2Q9Y4F9 1068 aa12.52□□□□□ -0.41
NOLC1-207ENST00000488254 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
NOLC1-207ENST00000488254 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms