RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SSFA2P28290 1259 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 KLHL40Q2TBA0 621 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 SEPT12Q8IYM1 358 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 MYRIPQ8NFW9 859 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 CROCC2H7BZ55 1655 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 KIAA0586Q9BVV6 1533 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 ADGRL2O95490 1459 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 ABCC10Q5T3U5 1492 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 SFI1A8K8P3 1242 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 LGR5O75473 907 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 SLFN5Q08AF3 891 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 VASH1Q7L8A9 365 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 TRIM50Q86XT4 487 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 TNPO1Q92973 898 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 CLP1Q92989 425 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 ITPKCQ96DU7 683 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 PRIMPOLQ96LW4 560 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 CNTNAP3BQ96NU0 1288 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 CNTNAP3Q9BZ76 1288 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 CDV3Q9UKY7 258 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 MAP4K5Q9Y4K4 846 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 EMILIN1Q9Y6C2 1016 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 EIF4G3O43432 1585 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 ABCA10Q8WWZ4 1543 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 ABCC5O15440 1437 aa5.87□□□□□ -1.47
CDC42BPA-213ENST00000488131 GPRASP1Q5JY77 1395 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 STAU1O95793 577 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 CCDC102BQ68D86 513 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 TXNDC2Q86VQ3 553 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 HSCBQ8IWL3 235 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 MEIOBQ8N635 442 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 TMPRSS4Q9NRS4 437 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 PRDM15P57071 1507 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 PIK3C2GO75747 1445 aa5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 SOS2Q07890 1332 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-213ENST00000488131 K7ELQ4 463 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 ARHGEF15O94989 841 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 ATP1A2P50993 1020 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 HMGN5P82970 282 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 USP4Q13107 963 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 TPCN2Q8NHX9 752 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 PMFBP1Q8TBY8 1022 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZNF830Q96NB3 372 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 CCDC9Q9Y3X0 531 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 UHRF1BP1LA0JNW5 1464 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 GRIN2AQ12879 1464 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 KRT76Q01546 638 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 XPCQ01831 940 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 NGEFQ8N5V2 710 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 SPOCK3Q9BQ16 436 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 POLR3GLQ9BT43 218 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 C22orf23Q9BZE7 217 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 CCDC39Q9UFE4 941 aa5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 GNEQ9Y223 722 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-213ENST00000488131 ERVK-9P63128 1117 aa5.84□□□□□ -1.47
CDC42BPA-213ENST00000488131 OCLNQ16625 522 aa5.84□□□□□ -1.47
CDC42BPA-213ENST00000488131 GAS2L2Q8NHY3 880 aa5.84□□□□□ -1.47
CDC42BPA-213ENST00000488131 CARD11Q9BXL7 1154 aa5.84□□□□□ -1.47
CDC42BPA-213ENST00000488131 PGPEP1Q9NXJ5 209 aa5.84□□□□□ -1.47
CDC42BPA-213ENST00000488131 ST20-MTHFSA0A0A6YYL1 179 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 FSHRP23945 695 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 SEC13P55735 322 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 SWI5Q1ZZU3 235 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 PLA2G4EQ3MJ16 856 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 TMCO4Q5TGY1 634 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 RGS22Q8NE09 1264 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 OSBPL3Q9H4L5 887 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 PANK3Q9H999 370 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 RNF17Q9BXT8 1623 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 EIF2AK4Q9P2K8 1649 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 REREQ9P2R6 1566 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 TTLL8A6PVC2 850 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 TMEM229AB2RXF0 380 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 GOLGA6L22H0YM25 854 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 PRMT3O60678 531 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 LILRA1O75019 489 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 NR3C2P08235 984 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 ATP2B4P23634 1241 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 MFAP1P55081 439 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 GABPB1Q06547 395 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 ATP2B3Q16720 1220 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 NBPF1Q3BBV0 1214 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 ZNF784Q8NCA9 323 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 TSEN2Q8NCE0 465 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 NANOS1Q8WY41 292 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 CYLDQ9NQC7 956 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 WDR62O43379 1518 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 NPC1L1Q9UHC9 1359 aa5.83□□□□□ -1.48
CDC42BPA-213ENST00000488131 SYNMO15061 1565 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 PRAG1Q86YV5 1406 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 PATL2C9JE40 543 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 E9PSI1 815 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 SLURP2P0DP57 97 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 ADD1P35611 737 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 SCNN1DP51172 638 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms