RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 ANTXR1Q9H6X2 564 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 CPS1P31327 1500 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 TPM2P07951 284 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 CPA1P15085 419 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 CEP57L1Q8IYX8 460 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 DDX19AQ9NUU7 478 aaKnown RBP13.85□□□□□ -0.19
TRA2B-214ENST00000487615 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
TRA2B-214ENST00000487615 ADAMTS13Q76LX8 1427 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 MYOM1P52179 1685 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 WASF1Q92558 559 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.191e-7■■□□□ 12.1
TRA2B-214ENST00000487615 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 SPATA31D1Q6ZQQ2 1576 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 SMC2O95347 1197 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 SYT1P21579 422 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 CCDC47Q96A33 483 aaKnown RBP13.84□□□□□ -0.19
TRA2B-214ENST00000487615 USP16Q9Y5T5 823 aa13.84□□□□□ -0.19
TRA2B-214ENST00000487615 OVOS2A0A0J9YW53 1432 aa13.83□□□□□ -0.19
TRA2B-214ENST00000487615 TECPR2O15040 1411 aa13.83□□□□□ -0.19
TRA2B-214ENST00000487615 OVOS2Q6IE36 1432 aa13.83□□□□□ -0.19
TRA2B-214ENST00000487615 Q6ZUG5 572 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 CCDC191Q8NCU4 936 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 NCOA7Q8NI08 942 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 DBNDD2Q9BQY9 259 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
TRA2B-214ENST00000487615 ERBB3P21860 1342 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 UQCRFS1P1P0C7P4 283 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 CAVIN4Q5BKX8 364 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 FAM227BQ96M60 508 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 DNM1Q05193 864 aaKnown RBP13.83□□□□□ -0.2
TRA2B-214ENST00000487615 PROSER3Q2NL68 480 aa13.83□□□□□ -0.2
TRA2B-214ENST00000487615 TSR1Q2NL82 804 aaKnown RBP13.83□□□□□ -0.2
TRA2B-214ENST00000487615 A1BGP04217 495 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 PRIM1P49642 420 aaKnown RBP13.82□□□□□ -0.2
TRA2B-214ENST00000487615 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 EYA2O00167 538 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 MCM5P33992 734 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 TIMM10P62072 90 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
TRA2B-214ENST00000487615 CD2BP2O95400 341 aaKnown RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 RNF113AO15541 343 aaKnown RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 ORC3Q9UBD5 711 aaPredicted RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
TRA2B-214ENST00000487615 MINDY4BA8MYZ0 360 aa13.81□□□□□ -0.2
TRA2B-214ENST00000487615 SLC27A2O14975 620 aa13.81□□□□□ -0.2
TRA2B-214ENST00000487615 CTAGE5O15320 804 aa13.81□□□□□ -0.2
TRA2B-214ENST00000487615 RAD21O60216 631 aa13.81□□□□□ -0.2
TRA2B-214ENST00000487615 UVSSAQ2YD98 709 aa13.81□□□□□ -0.2
TRA2B-214ENST00000487615 CCDC196A0A1B0GTZ2 297 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 TRIM34Q9BYJ4 488 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
TRA2B-214ENST00000487615 UNC5CLQ8IV45 518 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 RNF41Q9H4P4 317 aaPredicted RBP13.8□□□□□ -0.2
TRA2B-214ENST00000487615 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 ADGRL3Q9HAR2 1447 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 ERVV-2B6SEH9 535 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 PPFIA3O75145 1194 aa13.8□□□□□ -0.2
TRA2B-214ENST00000487615 DZIP3Q86Y13 1208 aaKnown RBP13.8□□□□□ -0.2
TRA2B-214ENST00000487615 KLF18A0A0U1RQI7 1052 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 ZPR1O75312 459 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
TRA2B-214ENST00000487615 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 DDB1Q16531 1140 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 SLC9C2Q5TAH2 1124 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 IRS4O14654 1257 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-214ENST00000487615 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 FSIP1Q8NA03 581 aa13.79□□□□□ -0.2
TRA2B-214ENST00000487615 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
TRA2B-214ENST00000487615 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 NOL7Q9UMY1 257 aaKnown RBP13.78□□□□□ -0.2
TRA2B-214ENST00000487615 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 ATP5JP18859 108 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 LMBRD1Q9NUN5 540 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 CRB1P82279 1406 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 PRAMEF22A3QJZ6 481 aa13.78□□□□□ -0.2
TRA2B-214ENST00000487615 BRD1O95696 1058 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms