RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PLVAPQ9BX97 442 aa9.54□□□□□ -0.88
CUL3-211ENST00000487558 SAP130Q9H0E3 1048 aa9.54□□□□□ -0.88
CUL3-211ENST00000487558 STIM2Q9P246 746 aa9.54□□□□□ -0.88
CUL3-211ENST00000487558 MPSTP25325 297 aa9.53□□□□□ -0.88
CUL3-211ENST00000487558 COX20Q5RI15 118 aa9.53□□□□□ -0.88
CUL3-211ENST00000487558 NPAS4Q8IUM7 802 aa9.53□□□□□ -0.88
CUL3-211ENST00000487558 ZNF232Q9UNY5 417 aa9.53□□□□□ -0.88
CUL3-211ENST00000487558 NDUFB5O43674 189 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 SIN3BO75182 1162 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 HIRAP54198 1017 aaPredicted RBP9.52□□□□□ -0.89
CUL3-211ENST00000487558 AAMPQ13685 434 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 SH3PXD2AQ5TCZ1 1133 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 POTEAQ6S8J7 498 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 ABTB2Q8N961 1025 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 MYO19Q96H55 970 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
CUL3-211ENST00000487558 ADARB2-AS1A8MUL3 147 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 ZNF16P17020 682 aaPredicted RBP9.51□□□□□ -0.89
CUL3-211ENST00000487558 ITGB7P26010 798 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 SFSWAPQ12872 951 aaKnown RBP9.51□□□□□ -0.89
CUL3-211ENST00000487558 COL19A1Q14993 1142 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 RGL4Q8IZJ4 473 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 GIPC2Q8TF65 315 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 CITED4Q96RK1 184 aa9.51□□□□□ -0.89
CUL3-211ENST00000487558 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
CUL3-211ENST00000487558 UNCXA6NJT0 531 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 ALAS2P22557 587 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 BRD2P25440 801 aaKnown RBP9.5□□□□□ -0.89
CUL3-211ENST00000487558 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
CUL3-211ENST00000487558 SLC30A3Q99726 388 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 RBCK1Q9BYM8 510 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 BCL11AQ9H165 835 aa9.5□□□□□ -0.89
CUL3-211ENST00000487558 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
CUL3-211ENST00000487558 C1orf53Q5VUE5 145 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 ALDH16A1Q8IZ83 802 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 Q8N3U1 123 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 STARD13Q9Y3M8 1113 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 HCN4Q9Y3Q4 1203 aa9.49□□□□□ -0.89
CUL3-211ENST00000487558 TNFRSF10BO14763 440 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 RTN1Q16799 776 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 TMC1Q8TDI8 760 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 TNFRSF25Q93038 417 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 MRRFQ96E11 262 aaKnown RBP9.48□□□□□ -0.89
CUL3-211ENST00000487558 PRDM6Q9NQX0 595 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 LRFN2Q9ULH4 789 aa9.48□□□□□ -0.89
CUL3-211ENST00000487558 DOC2BQ14184 412 aa9.47□□□□□ -0.89
CUL3-211ENST00000487558 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
CUL3-211ENST00000487558 GATA4P43694 442 aa9.46□□□□□ -0.9
CUL3-211ENST00000487558 KCNQ4P56696 695 aa9.46□□□□□ -0.9
CUL3-211ENST00000487558 SPEM2Q0P670 501 aa9.46□□□□□ -0.9
CUL3-211ENST00000487558 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
CUL3-211ENST00000487558 TMC7Q7Z402 723 aa9.46□□□□□ -0.9
CUL3-211ENST00000487558 SPDYE3A6NKU9 549 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 M0R082 166 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 PDE3BQ13370 1112 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 FBXO33Q7Z6M2 555 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 ZNF417Q8TAU3 575 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 ZNF587Q96SQ5 575 aaPredicted RBP9.45□□□□□ -0.9
CUL3-211ENST00000487558 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 SEMA6BQ9H3T3 888 aa9.45□□□□□ -0.9
CUL3-211ENST00000487558 FZD6O60353 706 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 DGKZQ13574 1117 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 MICALL1Q8N3F8 863 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 CCDC87Q9NVE4 849 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 ANKIB1Q9P2G1 1089 aa9.44□□□□□ -0.9
CUL3-211ENST00000487558 ALBP02768 609 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 PLCB3Q01970 1234 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 PRRT3Q5FWE3 981 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 ZNF280CQ8ND82 737 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 IFT43Q96FT9 208 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 HSH2DQ96JZ2 352 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
CUL3-211ENST00000487558 ZBTB39O15060 712 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 ADH7P40394 386 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 USP5P45974 858 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 FGD1P98174 961 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 TYRO3Q06418 890 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 HIF1AQ16665 826 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 C20orf204Q6ZNR8 217 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 SUSD3Q96L08 255 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 CEP63Q96MT8 703 aa9.42□□□□□ -0.9
CUL3-211ENST00000487558 KIAA1522Q9P206 1035 aaPredicted RBP9.42□□□□□ -0.9
CUL3-211ENST00000487558 TREHO43280 583 aa9.41□□□□□ -0.9
CUL3-211ENST00000487558 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
CUL3-211ENST00000487558 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
CUL3-211ENST00000487558 KLK14Q9P0G3 267 aa9.41□□□□□ -0.9
CUL3-211ENST00000487558 KCNH4Q9UQ05 1017 aa9.41□□□□□ -0.9
CUL3-211ENST00000487558 NID1P14543 1247 aa9.4□□□□□ -0.9
CUL3-211ENST00000487558 PCSK2P16519 638 aa9.4□□□□□ -0.9
CUL3-211ENST00000487558 MZF1P28698 734 aaPredicted RBP9.4□□□□□ -0.9
CUL3-211ENST00000487558 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
CUL3-211ENST00000487558 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
CUL3-211ENST00000487558 ETFBKMTQ8IXQ9 262 aa9.4□□□□□ -0.9
CUL3-211ENST00000487558 FAM13BQ9NYF5 915 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms