RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ZNF521Q96K83 1311 aa14.68□□□□□ -0.06
SPEN-205ENST00000487496 PCCAP05165 728 aaPredicted RBP14.68□□□□□ -0.06
SPEN-205ENST00000487496 IGKV5-2P06315 115 aa14.68□□□□□ -0.06
SPEN-205ENST00000487496 LARGE2Q8N3Y3 721 aa14.68□□□□□ -0.06
SPEN-205ENST00000487496 JARID2Q92833 1246 aaPredicted RBP14.68□□□□□ -0.06
SPEN-205ENST00000487496 CELF1Q92879 486 aaKnown RBP14.68□□□□□ -0.06
SPEN-205ENST00000487496 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
SPEN-205ENST00000487496 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
SPEN-205ENST00000487496 HSP90B1P14625 803 aaKnown RBP14.67□□□□□ -0.06
SPEN-205ENST00000487496 APLP1P51693 650 aa14.67□□□□□ -0.06
SPEN-205ENST00000487496 NEXNQ0ZGT2 675 aa14.67□□□□□ -0.06
SPEN-205ENST00000487496 FLIIQ13045 1269 aa14.67□□□□□ -0.06
SPEN-205ENST00000487496 DPP8Q6V1X1 898 aaPredicted RBP14.67□□□□□ -0.06
SPEN-205ENST00000487496 TMC4Q7Z404 712 aa14.67□□□□□ -0.06
SPEN-205ENST00000487496 MPNDQ8N594 471 aa14.67□□□□□ -0.06
SPEN-205ENST00000487496 RTFDC1Q9BY42 306 aaPredicted RBP14.67□□□□□ -0.06
SPEN-205ENST00000487496 COL4A5P29400 1685 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 IQCA1LA6NCM1 817 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 PPIP5K2O43314 1243 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 PDE8AO60658 829 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 CWF19L2Q2TBE0 894 aaKnown RBP14.66□□□□□ -0.06
SPEN-205ENST00000487496 SUPT20HQ8NEM7 779 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 VPS33BQ9H267 617 aa14.66□□□□□ -0.06
SPEN-205ENST00000487496 NEURL1BA8MQ27 555 aa14.65□□□□□ -0.06
SPEN-205ENST00000487496 EIF6P56537 245 aaKnown RBP14.65□□□□□ -0.06
SPEN-205ENST00000487496 RPS8P62241 208 aaKnown RBP14.65□□□□□ -0.06
SPEN-205ENST00000487496 FKBP5Q13451 457 aaPredicted RBP14.65□□□□□ -0.06
SPEN-205ENST00000487496 AOC3Q16853 763 aa14.65□□□□□ -0.06
SPEN-205ENST00000487496 GPC2Q8N158 579 aa14.65□□□□□ -0.06
SPEN-205ENST00000487496 SEC31BQ9NQW1 1179 aa14.65□□□□□ -0.06
SPEN-205ENST00000487496 CDHR2Q9BYE9 1310 aa14.65□□□□□ -0.06
SPEN-205ENST00000487496 TAF1P21675 1872 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 CCER2I3L3R5 266 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 POTEJP0CG39 1038 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 CCDC152Q4G0S7 254 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 NIM1KQ8IY84 436 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 DNAAF4Q8WXU2 420 aa14.64□□□□□ -0.07
SPEN-205ENST00000487496 TAF1DQ9H5J8 278 aaPredicted RBP14.64□□□□□ -0.07
SPEN-205ENST00000487496 COL4A1P02462 1669 aa14.63□□□□□ -0.07
SPEN-205ENST00000487496 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
SPEN-205ENST00000487496 CCDC85AQ96PX6 553 aaPredicted RBP14.63□□□□□ -0.07
SPEN-205ENST00000487496 HACL1Q9UJ83 578 aa14.63□□□□□ -0.07
SPEN-205ENST00000487496 NSFL1CQ9UNZ2 370 aaKnown RBP14.63□□□□□ -0.07
SPEN-205ENST00000487496 GJA3Q9Y6H8 435 aa14.63□□□□□ -0.07
SPEN-205ENST00000487496 H7C1W4 665 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 EPHX2P34913 555 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 GPSM2P81274 684 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 GCKRQ14397 625 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 LINS1Q8NG48 757 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 ZNRF3Q9ULT6 936 aa14.62□□□□□ -0.07
SPEN-205ENST00000487496 CTSWP56202 376 aa14.61□□□□□ -0.07
SPEN-205ENST00000487496 HTRA3P83110 453 aa14.61□□□□□ -0.07
SPEN-205ENST00000487496 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
SPEN-205ENST00000487496 TTLL11Q8NHH1 800 aa14.61□□□□□ -0.07
SPEN-205ENST00000487496 SCN4AP35499 1836 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 E9PSI1 815 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 F6X3S4 739 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 CXCL9Q07325 125 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 EAPPQ56P03 285 aaPredicted RBP14.6□□□□□ -0.07
SPEN-205ENST00000487496 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 POLLQ9UGP5 575 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 LRRC37AA6NMS7 1700 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 DUOX1Q9NRD9 1551 aa14.6□□□□□ -0.07
SPEN-205ENST00000487496 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 SCNN1DP51172 638 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 SLFN5Q08AF3 891 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 WASHC4Q2M389 1173 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
SPEN-205ENST00000487496 TBC1D16Q8TBP0 767 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
SPEN-205ENST00000487496 LMOD1P29536 600 aaPredicted RBP14.58□□□□□ -0.08
SPEN-205ENST00000487496 CASP7P55210 303 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 BEND3Q5T5X7 828 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 ANKRD18AQ8IVF6 992 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 CDCA7LQ96GN5 454 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 CDC5LQ99459 802 aaKnown RBP14.58□□□□□ -0.08
SPEN-205ENST00000487496 PLA2G12BQ9BX93 195 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 GREM2Q9H772 168 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 PODXL2Q9NZ53 605 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
SPEN-205ENST00000487496 YDJCA8MPS7 323 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 RIMBP2O15034 1052 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 RAD17O75943 681 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 EPS15P42566 896 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 GPR101Q96P66 508 aaPredicted RBP14.57□□□□□ -0.08
SPEN-205ENST00000487496 EYA3Q99504 573 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 RTL9Q8NET4 1388 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
SPEN-205ENST00000487496 CSF1RP07333 972 aa14.56□□□□□ -0.08
SPEN-205ENST00000487496 TNIP1Q15025 636 aa14.56□□□□□ -0.08
SPEN-205ENST00000487496 DBNDD1Q9H9R9 158 aa14.56□□□□□ -0.08
SPEN-205ENST00000487496 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
SPEN-205ENST00000487496 LTBP1Q14766 1721 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 UFL1O94874 794 aa14.55□□□□□ -0.08
SPEN-205ENST00000487496 ITGBL1O95965 494 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms