RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 KCNQ4P56696 695 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 TBC1D9Q6ZT07 1266 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
VAMP3-203ENST00000487194 SCN7AQ01118 1682 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 TRIM6-TRIM34B2RNG4 842 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 SEC24BO95487 1268 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 NTSR2O95665 410 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 ITGA6P23229 1130 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 SSFA2P28290 1259 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 TFCP2Q12800 502 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 TXNRD1Q16881 649 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 CCDC152Q4G0S7 254 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 TNNI3KQ59H18 835 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 ATG9AQ7Z3C6 839 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 PI4K2BQ8TCG2 481 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 ARHGEF1Q92888 912 aaKnown RBP7.52□□□□□ -1.21
VAMP3-203ENST00000487194 EAF2Q96CJ1 260 aaPredicted RBP7.52□□□□□ -1.21
VAMP3-203ENST00000487194 SETDB2Q96T68 719 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 CEP126Q9P2H0 1117 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 AKAP2Q9Y2D5 859 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 FPGT-TNNI3KV9GXZ4 949 aa7.52□□□□□ -1.21
VAMP3-203ENST00000487194 MYH3P11055 1940 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 FAM177BA6PVY3 158 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 APBA3O96018 575 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
VAMP3-203ENST00000487194 MFAP1P55081 439 aaKnown RBP7.51□□□□□ -1.21
VAMP3-203ENST00000487194 SLC10A5Q5PT55 438 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 TPTE2Q6XPS3 522 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 RILPL2Q969X0 211 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 TBC1D32Q96NH3 1257 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
VAMP3-203ENST00000487194 C22orf23Q9BZE7 217 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 GREM2Q9H772 168 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
VAMP3-203ENST00000487194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 HIP1O00291 1037 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 PHF14O94880 888 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 REC8O95072 547 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 HCLS1P14317 486 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 ATP5JP18859 108 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 SF3B3Q15393 1217 aaKnown RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 LRRC24Q50LG9 513 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 TBC1D9BQ66K14 1250 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 LDHAL6AQ6ZMR3 332 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 TICAM2Q86XR7 235 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 SYNE4Q8N205 404 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 FLAD1Q8NFF5 587 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 EVI5LQ96CN4 794 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 CCDC8Q9H0W5 538 aaPredicted RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 CNNM1Q9NRU3 951 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 SRP68Q9UHB9 627 aaKnown RBP7.5□□□□□ -1.21
VAMP3-203ENST00000487194 MROH5Q6ZUA9 1318 aa7.5□□□□□ -1.21
VAMP3-203ENST00000487194 CARMIL3Q8ND23 1372 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 LAMB2P55268 1798 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 A0A1B0GUL7 405 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 CHMLP26374 656 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 IGHMBP2P38935 993 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 ERFEQ4G0M1 354 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 BICDL1Q6ZP65 573 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 RUFY2Q8WXA3 655 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 NEUROD6Q96NK8 337 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 CCDC85AQ96PX6 553 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 CDC5LQ99459 802 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 MPHOSPH8Q99549 860 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 PUS3Q9BZE2 481 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 DBNLQ9UJU6 430 aaKnown RBP7.49□□□□□ -1.21
VAMP3-203ENST00000487194 RIPOR2Q9Y4F9 1068 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 TUBGCP6Q96RT7 1819 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 ZNF609O15014 1411 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 UBR3Q6ZT12 1888 aa7.49□□□□□ -1.21
VAMP3-203ENST00000487194 ABCC12Q96J65 1359 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 NPHP1O15259 732 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 BECN1Q14457 450 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 COL24A1Q17RW2 1714 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 CCDC158Q5M9N0 1113 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 GORABQ5T7V8 394 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 PROM2Q8N271 834 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 ESYT1Q9BSJ8 1104 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 TLR7Q9NYK1 1049 aaKnown RBP7.48□□□□□ -1.21
VAMP3-203ENST00000487194 TFCP2L1Q9NZI6 479 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 DAXXQ9UER7 740 aaPredicted RBP7.48□□□□□ -1.21
VAMP3-203ENST00000487194 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
VAMP3-203ENST00000487194 RGPD3A6NKT7 1758 aaPredicted RBP7.48□□□□□ -1.21
VAMP3-203ENST00000487194 RGPD4Q7Z3J3 1758 aa7.48□□□□□ -1.21
VAMP3-203ENST00000487194 RFX7Q2KHR2 1363 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 C4AP0C0L4 1744 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 DDX60Q8IY21 1712 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms