RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 GRIPAP1Q4V328 841 aa28.56■■■□□ 2.16
CDHR3-212ENST00000487084 DPY19L2Q6NUT2 758 aa28.56■■■□□ 2.16
CDHR3-212ENST00000487084 RRAGCQ9HB90 399 aa28.56■■■□□ 2.16
CDHR3-212ENST00000487084 DICER1Q9UPY3 1922 aaKnown RBP28.54■■■□□ 2.16
CDHR3-212ENST00000487084 F6X3S4 739 aa28.54■■■□□ 2.16
CDHR3-212ENST00000487084 PDE8AO60658 829 aa28.54■■■□□ 2.16
CDHR3-212ENST00000487084 C16orf71Q8IYS4 520 aaPredicted RBP28.54■■■□□ 2.16
CDHR3-212ENST00000487084 CACNA1FO60840 1977 aa28.53■■■□□ 2.16
CDHR3-212ENST00000487084 CDHR2Q9BYE9 1310 aa28.53■■■□□ 2.16
CDHR3-212ENST00000487084 SP8Q8IXZ3 490 aa28.53■■■□□ 2.16
CDHR3-212ENST00000487084 CELF1Q92879 486 aaKnown RBP28.53■■■□□ 2.16
CDHR3-212ENST00000487084 CCDC85AQ96PX6 553 aaPredicted RBP28.53■■■□□ 2.16
CDHR3-212ENST00000487084 CCDC152Q4G0S7 254 aa28.52■■■□□ 2.16
CDHR3-212ENST00000487084 DPP8Q6V1X1 898 aaPredicted RBP28.51■■■□□ 2.15
CDHR3-212ENST00000487084 UBE3BQ7Z3V4 1068 aa28.51■■■□□ 2.15
CDHR3-212ENST00000487084 LINS1Q8NG48 757 aa28.51■■■□□ 2.15
CDHR3-212ENST00000487084 GCKRQ14397 625 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 TMC4Q7Z404 712 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 LARGE2Q8N3Y3 721 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 MPNDQ8N594 471 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 JDP2Q8WYK2 163 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 SEC31BQ9NQW1 1179 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 TAF1P21675 1872 aa28.5■■■□□ 2.15
CDHR3-212ENST00000487084 PPIP5K2O43314 1243 aa28.48■■■□□ 2.15
CDHR3-212ENST00000487084 DDNO94850 711 aaPredicted RBP28.48■■■□□ 2.15
CDHR3-212ENST00000487084 CTSWP56202 376 aa28.48■■■□□ 2.15
CDHR3-212ENST00000487084 SUPT20HQ8NEM7 779 aa28.48■■■□□ 2.15
CDHR3-212ENST00000487084 ZNF541Q9H0D2 1346 aa28.47■■■□□ 2.15
CDHR3-212ENST00000487084 H7C1W4 665 aa28.47■■■□□ 2.15
CDHR3-212ENST00000487084 TOMM70O94826 608 aa28.47■■■□□ 2.15
CDHR3-212ENST00000487084 RPS8P62241 208 aaKnown RBP28.47■■■□□ 2.15
CDHR3-212ENST00000487084 SLC4A10Q6U841 1118 aa28.47■■■□□ 2.15
CDHR3-212ENST00000487084 BCL2L13Q9BXK5 485 aa28.47■■■□□ 2.15
CDHR3-212ENST00000487084 COL4A1P02462 1669 aa28.46■■■□□ 2.15
CDHR3-212ENST00000487084 VEGFAP15692 232 aaPredicted RBP28.46■■■□□ 2.15
CDHR3-212ENST00000487084 AOC3Q16853 763 aa28.46■■■□□ 2.15
CDHR3-212ENST00000487084 MRPL50Q8N5N7 158 aaKnown RBP28.46■■■□□ 2.15
CDHR3-212ENST00000487084 BEND3Q5T5X7 828 aa28.45■■■□□ 2.14
CDHR3-212ENST00000487084 TRMT2AQ8IZ69 625 aaKnown RBP28.45■■■□□ 2.14
CDHR3-212ENST00000487084 SSH1Q8WYL5 1049 aa28.45■■■□□ 2.14
CDHR3-212ENST00000487084 NIM1KQ8IY84 436 aa28.44■■■□□ 2.14
CDHR3-212ENST00000487084 RTFDC1Q9BY42 306 aaPredicted RBP28.44■■■□□ 2.14
CDHR3-212ENST00000487084 COL4A5P29400 1685 aa28.43■■■□□ 2.14
CDHR3-212ENST00000487084 FZD9O00144 591 aa28.43■■■□□ 2.14
CDHR3-212ENST00000487084 HNRNPUQ00839 825 aaKnown RBP eCLIP28.43■■■□□ 2.14
CDHR3-212ENST00000487084 NSFL1CQ9UNZ2 370 aaKnown RBP28.43■■■□□ 2.14
CDHR3-212ENST00000487084 EIF6P56537 245 aaKnown RBP28.42■■■□□ 2.14
CDHR3-212ENST00000487084 ANKRD18AQ8IVF6 992 aa28.42■■■□□ 2.14
CDHR3-212ENST00000487084 TTLL11Q8NHH1 800 aa28.42■■■□□ 2.14
CDHR3-212ENST00000487084 WDR90Q96KV7 1748 aa28.41■■■□□ 2.14
CDHR3-212ENST00000487084 GPSM2P81274 684 aa28.41■■■□□ 2.14
CDHR3-212ENST00000487084 RBM46Q8TBY0 533 aaKnown RBP28.41■■■□□ 2.14
CDHR3-212ENST00000487084 GREM2Q9H772 168 aa28.41■■■□□ 2.14
CDHR3-212ENST00000487084 SMC4Q9NTJ3 1288 aa28.41■■■□□ 2.14
CDHR3-212ENST00000487084 LRRC37AA6NMS7 1700 aa28.4■■■□□ 2.14
CDHR3-212ENST00000487084 POTECB2RU33 542 aa28.4■■■□□ 2.14
CDHR3-212ENST00000487084 CASP7P55210 303 aa28.4■■■□□ 2.14
CDHR3-212ENST00000487084 CDC5LQ99459 802 aaKnown RBP28.4■■■□□ 2.14
CDHR3-212ENST00000487084 SRCIN1Q9C0H9 1055 aa28.4■■■□□ 2.14
CDHR3-212ENST00000487084 VPS33BQ9H267 617 aa28.4■■■□□ 2.14
CDHR3-212ENST00000487084 ALDH1L2Q3SY69 923 aa28.39■■■□□ 2.14
CDHR3-212ENST00000487084 PLA2G12BQ9BX93 195 aa28.39■■■□□ 2.14
CDHR3-212ENST00000487084 GJA3Q9Y6H8 435 aa28.39■■■□□ 2.14
CDHR3-212ENST00000487084 C6orf229H3BNL8 230 aa28.38■■■□□ 2.13
CDHR3-212ENST00000487084 PTPRCP08575 1304 aa28.38■■■□□ 2.13
CDHR3-212ENST00000487084 DUOX1Q9NRD9 1551 aa28.37■■■□□ 2.13
CDHR3-212ENST00000487084 ALDH1L1O75891 902 aa28.37■■■□□ 2.13
CDHR3-212ENST00000487084 CT47B1P0C2W7 299 aaPredicted RBP28.37■■■□□ 2.13
CDHR3-212ENST00000487084 KIAA2012Q0VF49 1180 aa28.37■■■□□ 2.13
CDHR3-212ENST00000487084 C9orf78Q9NZ63 289 aaPredicted RBP28.37■■■□□ 2.13
CDHR3-212ENST00000487084 ANKIB1Q9P2G1 1089 aa28.37■■■□□ 2.13
CDHR3-212ENST00000487084 MYH3P11055 1940 aa28.36■■■□□ 2.13
CDHR3-212ENST00000487084 FAM161AQ3B820 660 aa28.36■■■□□ 2.13
CDHR3-212ENST00000487084 GPC2Q8N158 579 aa28.36■■■□□ 2.13
CDHR3-212ENST00000487084 L3MBTL3Q96JM7 780 aaPredicted RBP28.36■■■□□ 2.13
CDHR3-212ENST00000487084 IQCA1LA6NCM1 817 aa28.35■■■□□ 2.13
CDHR3-212ENST00000487084 GRM8O00222 908 aa28.35■■■□□ 2.13
CDHR3-212ENST00000487084 WASHC4Q2M389 1173 aa28.35■■■□□ 2.13
CDHR3-212ENST00000487084 POLLQ9UGP5 575 aa28.35■■■□□ 2.13
CDHR3-212ENST00000487084 RTL9Q8NET4 1388 aa28.35■■■□□ 2.13
CDHR3-212ENST00000487084 RIMBP2O15034 1052 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 HSPA6P17066 643 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 ITGA6P23229 1130 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 SMC1BQ8NDV3 1235 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 GPR101Q96P66 508 aaPredicted RBP28.34■■■□□ 2.13
CDHR3-212ENST00000487084 ZNRF3Q9ULT6 936 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 CHMP3Q9Y3E7 222 aa28.34■■■□□ 2.13
CDHR3-212ENST00000487084 UFL1O94874 794 aa28.33■■■□□ 2.13
CDHR3-212ENST00000487084 IGHMBP2P38935 993 aaKnown RBP28.33■■■□□ 2.13
CDHR3-212ENST00000487084 TBC1D16Q8TBP0 767 aa28.33■■■□□ 2.13
CDHR3-212ENST00000487084 EYA3Q99504 573 aa28.33■■■□□ 2.13
CDHR3-212ENST00000487084 FSTL1Q12841 308 aa28.32■■■□□ 2.12
CDHR3-212ENST00000487084 HACL1Q9UJ83 578 aa28.32■■■□□ 2.12
CDHR3-212ENST00000487084 GGA1Q9UJY5 639 aa28.32■■■□□ 2.12
CDHR3-212ENST00000487084 CSF1RP07333 972 aa28.31■■■□□ 2.12
CDHR3-212ENST00000487084 BSDC1Q9NW68 430 aaPredicted RBP28.31■■■□□ 2.12
CDHR3-212ENST00000487084 PODXL2Q9NZ53 605 aa28.31■■■□□ 2.12
CDHR3-212ENST00000487084 XDHP47989 1333 aa28.3■■■□□ 2.12
CDHR3-212ENST00000487084 FOXO4P98177 505 aa28.3■■■□□ 2.12
CDHR3-212ENST00000487084 TAF1DQ9H5J8 278 aaPredicted RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms