RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
LBR-207ENST00000487054 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 ATP5J2-PTCD1G3V325 749 aa13.09□□□□□ -0.31
LBR-207ENST00000487054 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
LBR-207ENST00000487054 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
LBR-207ENST00000487054 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
LBR-207ENST00000487054 TRMT112Q9UI30 125 aaKnown RBP13.09□□□□□ -0.31
LBR-207ENST00000487054 DUOX1Q9NRD9 1551 aa13.08□□□□□ -0.32
LBR-207ENST00000487054 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.32
LBR-207ENST00000487054 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
LBR-207ENST00000487054 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
LBR-207ENST00000487054 JMYQ8N9B5 988 aa13.08□□□□□ -0.32
LBR-207ENST00000487054 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
LBR-207ENST00000487054 LRRC37AA6NMS7 1700 aa13.08□□□□□ -0.32
LBR-207ENST00000487054 HOXB7P09629 217 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 AOC3Q16853 763 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 PLBD2Q8NHP8 589 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
LBR-207ENST00000487054 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
LBR-207ENST00000487054 GJA3Q9Y6H8 435 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
LBR-207ENST00000487054 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 EPHX2P34913 555 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 CC2D2BQ6DHV5 1058 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 GPC2Q8N158 579 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 JDP2Q8WYK2 163 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 HACL1Q9UJ83 578 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
LBR-207ENST00000487054 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
LBR-207ENST00000487054 LDHDQ86WU2 507 aa13.05□□□□□ -0.32
LBR-207ENST00000487054 TSPYL6Q8N831 410 aa13.05□□□□□ -0.32
LBR-207ENST00000487054 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
LBR-207ENST00000487054 ITGBL1O95965 494 aaPredicted RBP13.04□□□□□ -0.32
LBR-207ENST00000487054 EPS15P42566 896 aa13.04□□□□□ -0.32
LBR-207ENST00000487054 SCNN1DP51172 638 aa13.04□□□□□ -0.32
LBR-207ENST00000487054 MAP1SQ66K74 1059 aaPredicted RBP13.04□□□□□ -0.32
LBR-207ENST00000487054 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
LBR-207ENST00000487054 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
LBR-207ENST00000487054 ZNF521Q96K83 1311 aa13.04□□□□□ -0.32
LBR-207ENST00000487054 EIF6P56537 245 aaKnown RBP13.03□□□□□ -0.32
LBR-207ENST00000487054 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.32
LBR-207ENST00000487054 GRAPQ13588 217 aa13.03□□□□□ -0.32
LBR-207ENST00000487054 DDX46Q7L014 1031 aaKnown RBP13.03□□□□□ -0.32
LBR-207ENST00000487054 GRAPLQ8TC17 118 aaPredicted RBP13.03□□□□□ -0.32
LBR-207ENST00000487054 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
LBR-207ENST00000487054 CELF1Q92879 486 aaKnown RBP13.03□□□□□ -0.32
LBR-207ENST00000487054 COL13A1Q5TAT6 717 aaPredicted RBP13.02□□□□□ -0.33
LBR-207ENST00000487054 DPP8Q6V1X1 898 aaPredicted RBP13.02□□□□□ -0.33
LBR-207ENST00000487054 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 SP8Q8IXZ3 490 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 MPNDQ8N594 471 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 MYD88Q99836 296 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 RTFDC1Q9BY42 306 aaPredicted RBP13.02□□□□□ -0.33
LBR-207ENST00000487054 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
LBR-207ENST00000487054 BBOX1O75936 387 aa13.01□□□□□ -0.33
LBR-207ENST00000487054 CXCL9Q07325 125 aa13.01□□□□□ -0.33
LBR-207ENST00000487054 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
LBR-207ENST00000487054 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
LBR-207ENST00000487054 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
LBR-207ENST00000487054 SPEF2Q9C093 1822 aa13□□□□□ -0.33
LBR-207ENST00000487054 SHTN1A0MZ66 631 aa13□□□□□ -0.33
LBR-207ENST00000487054 YDJCA8MPS7 323 aa13□□□□□ -0.33
LBR-207ENST00000487054 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
LBR-207ENST00000487054 HSPA1AP0DMV8 641 aaKnown RBP13□□□□□ -0.33
LBR-207ENST00000487054 HSPA1BP0DMV9 641 aaKnown RBP13□□□□□ -0.33
LBR-207ENST00000487054 GOLGA2Q08379 1002 aa13□□□□□ -0.33
LBR-207ENST00000487054 SF3B3Q15393 1217 aaKnown RBP13□□□□□ -0.33
LBR-207ENST00000487054 CNTROBQ8N137 903 aa13□□□□□ -0.33
LBR-207ENST00000487054 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
LBR-207ENST00000487054 E9PSI1 815 aa12.99□□□□□ -0.33
LBR-207ENST00000487054 RAD17O75943 681 aa12.99□□□□□ -0.33
LBR-207ENST00000487054 GPSM2P81274 684 aa12.99□□□□□ -0.33
LBR-207ENST00000487054 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
LBR-207ENST00000487054 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
LBR-207ENST00000487054 PNMA8AQ86V59 439 aaPredicted RBP12.99□□□□□ -0.33
LBR-207ENST00000487054 CCDC85AQ96PX6 553 aaPredicted RBP12.99□□□□□ -0.33
LBR-207ENST00000487054 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
LBR-207ENST00000487054 ZNRF3Q9ULT6 936 aa12.99□□□□□ -0.33
LBR-207ENST00000487054 SCN9AQ15858 1988 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 CNTNAP1P78357 1384 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 TRAF5O00463 557 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 LMOD1P29536 600 aaPredicted RBP12.98□□□□□ -0.33
LBR-207ENST00000487054 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
LBR-207ENST00000487054 G2E3Q7L622 706 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
LBR-207ENST00000487054 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 GPRC5DQ9NZD1 345 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
LBR-207ENST00000487054 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms