RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
CCDC171-208ENST00000486641 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.41
CCDC171-208ENST00000486641 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
CCDC171-208ENST00000486641 MAP3K5Q99683 1374 aa12.46□□□□□ -0.42
CCDC171-208ENST00000486641 CTAGE5O15320 804 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 JAK2O60674 1132 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 SASH3O75995 380 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 IFIT2P09913 472 aaKnown RBP12.45□□□□□ -0.42
CCDC171-208ENST00000486641 PSMA5P28066 241 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 HSP90AB2PQ58FF8 381 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-208ENST00000486641 MAP4K1Q92918 833 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 IMPACTQ9P2X3 320 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 TTC41PQ6P2S7 1318 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 USP42Q9H9J4 1324 aaKnown RBP12.45□□□□□ -0.42
CCDC171-208ENST00000486641 MYO1CO00159 1063 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 OAS2P29728 719 aaKnown RBP12.45□□□□□ -0.42
CCDC171-208ENST00000486641 NOP2P46087 812 aaKnown RBP12.45□□□□□ -0.42
CCDC171-208ENST00000486641 ZSCAN26Q16670 478 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 NRKQ7Z2Y5 1582 aa12.45□□□□□ -0.42
CCDC171-208ENST00000486641 TBC1D8O95759 1140 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 ANKRD1Q15327 319 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 HOMER1Q86YM7 354 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 BRF1Q92994 677 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 EPC1Q9H2F5 836 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 CFAP45Q9UL16 551 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 ATP8B1O43520 1251 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 ETF1P62495 437 aaKnown RBP12.44□□□□□ -0.42
CCDC171-208ENST00000486641 TMC6Q7Z403 805 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 REXO1L1PQ8IX06 675 aa12.44□□□□□ -0.42
CCDC171-208ENST00000486641 TMEM131LA2VDJ0 1609 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 WASLO00401 505 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 TUBB4AP04350 444 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 GPS2Q13227 327 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 PAXIP1Q6ZW49 1069 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 FANCGO15287 622 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 TADA3O75528 432 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 GYS2P54840 703 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 CCDC150Q8NCX0 1101 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 MNS1Q8NEH6 495 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 NUDT16Q96DE0 195 aaKnown RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 CCDC34Q96HJ3 373 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 CARD6Q9BX69 1037 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 TMX1Q9H3N1 280 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
CCDC171-208ENST00000486641 DLC1Q96QB1 1528 aa12.43□□□□□ -0.42
CCDC171-208ENST00000486641 PHLPP2Q6ZVD8 1323 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 H3BQV1 296 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 DHX16O60231 1041 aaKnown RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 SFPQP23246 707 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 KCNJ6P48051 423 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 TRIM65Q6PJ69 517 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 ZSCAN16Q9H4T2 348 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 FAM208AQ9UK61 1670 aaKnown RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 EFCAB8A8MWE9 144 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 URI1O94763 535 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 SMC2O95347 1197 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 CCDC158Q5M9N0 1113 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 CC2D1AQ6P1N0 951 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-208ENST00000486641 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
CCDC171-208ENST00000486641 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
CCDC171-208ENST00000486641 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
CCDC171-208ENST00000486641 KINO60870 393 aaKnown RBP12.41□□□□□ -0.42
CCDC171-208ENST00000486641 CASQ1P31415 396 aa12.41□□□□□ -0.42
CCDC171-208ENST00000486641 CCDC73Q6ZRK6 1079 aa12.41□□□□□ -0.42
CCDC171-208ENST00000486641 FBXO18Q8NFZ0 1043 aa12.41□□□□□ -0.42
CCDC171-208ENST00000486641 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
CCDC171-208ENST00000486641 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
CCDC171-208ENST00000486641 TPM1P09493 284 aa12.4□□□□□ -0.42
CCDC171-208ENST00000486641 EVCP57679 992 aa12.4□□□□□ -0.42
CCDC171-208ENST00000486641 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
CCDC171-208ENST00000486641 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
CCDC171-208ENST00000486641 SRRTQ9BXP5 876 aaKnown RBP12.4□□□□□ -0.42
CCDC171-208ENST00000486641 N4BP2Q86UW6 1770 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-208ENST00000486641 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms