RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 EPHA10Q5JZY3 1008 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 ANKRD44Q8N8A2 993 aa17.3■□□□□ 0.36
NELFCD-209ENST00000486263 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
NELFCD-209ENST00000486263 SRGAP3O43295 1099 aa17.29■□□□□ 0.36
NELFCD-209ENST00000486263 GRIN3BO60391 1043 aa17.29■□□□□ 0.36
NELFCD-209ENST00000486263 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
NELFCD-209ENST00000486263 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-209ENST00000486263 CCDC57Q2TAC2 916 aa17.28■□□□□ 0.36
NELFCD-209ENST00000486263 TAF7LQ5H9L4 462 aa17.28■□□□□ 0.36
NELFCD-209ENST00000486263 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
NELFCD-209ENST00000486263 PDE6BP35913 854 aa17.27■□□□□ 0.36
NELFCD-209ENST00000486263 IFIT5Q13325 482 aaKnown RBP17.27■□□□□ 0.36
NELFCD-209ENST00000486263 MTX1Q13505 466 aa17.27■□□□□ 0.36
NELFCD-209ENST00000486263 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
NELFCD-209ENST00000486263 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
NELFCD-209ENST00000486263 BRIP1Q9BX63 1249 aa17.27■□□□□ 0.36
NELFCD-209ENST00000486263 PNMA6EA0A0J9YXQ4 647 aa17.26■□□□□ 0.35
NELFCD-209ENST00000486263 CSF1RP07333 972 aa17.26■□□□□ 0.35
NELFCD-209ENST00000486263 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
NELFCD-209ENST00000486263 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
NELFCD-209ENST00000486263 UTRNP46939 3433 aa17.26■□□□□ 0.35
NELFCD-209ENST00000486263 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
NELFCD-209ENST00000486263 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
NELFCD-209ENST00000486263 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
NELFCD-209ENST00000486263 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 RIC1Q4ADV7 1423 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
NELFCD-209ENST00000486263 ITGA6P23229 1130 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
NELFCD-209ENST00000486263 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 B4GALNT3Q6L9W6 998 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 SIRT2Q8IXJ6 389 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
NELFCD-209ENST00000486263 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 GREM2Q9H772 168 aa17.24■□□□□ 0.35
NELFCD-209ENST00000486263 YY1P25490 414 aa17.23■□□□□ 0.35
NELFCD-209ENST00000486263 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-209ENST00000486263 POLA2Q14181 598 aa17.23■□□□□ 0.35
NELFCD-209ENST00000486263 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
NELFCD-209ENST00000486263 RBM17Q96I25 401 aaKnown RBP17.23■□□□□ 0.35
NELFCD-209ENST00000486263 CDC5LQ99459 802 aaKnown RBP17.23■□□□□ 0.35
NELFCD-209ENST00000486263 PDZRN3Q9UPQ7 1066 aa17.23■□□□□ 0.35
NELFCD-209ENST00000486263 GOLGB1Q14789 3259 aaKnown RBP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 H0YIN7 160 aa17.22■□□□□ 0.35
NELFCD-209ENST00000486263 SURF6O75683 361 aaKnown RBP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 G3BP1Q13283 466 aaKnown RBP eCLIP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 HSP90AB4PQ58FF6 505 aa17.22■□□□□ 0.35
NELFCD-209ENST00000486263 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
NELFCD-209ENST00000486263 LAMB2P55268 1798 aa17.22■□□□□ 0.35
NELFCD-209ENST00000486263 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
NELFCD-209ENST00000486263 IGHDP01880 384 aa17.21■□□□□ 0.35
NELFCD-209ENST00000486263 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
NELFCD-209ENST00000486263 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
NELFCD-209ENST00000486263 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
NELFCD-209ENST00000486263 MYH3P11055 1940 aa17.21■□□□□ 0.35
NELFCD-209ENST00000486263 RTL9Q8NET4 1388 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 A0A0G2JLW4 131 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-209ENST00000486263 NPR1P16066 1061 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 DPEP1P16444 411 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 ANKRD18AQ8IVF6 992 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 GCC1Q96CN9 775 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-209ENST00000486263 SIL1Q9H173 461 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
NELFCD-209ENST00000486263 PA2G4Q9UQ80 394 aaKnown RBP17.2■□□□□ 0.34
NELFCD-209ENST00000486263 KCNA3P22001 575 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
NELFCD-209ENST00000486263 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
NELFCD-209ENST00000486263 CRY2Q49AN0 593 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 LDHAL6AQ6ZMR3 332 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 CENPQQ7L2Z9 268 aaPredicted RBP17.19■□□□□ 0.34
NELFCD-209ENST00000486263 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 ZNF622Q969S3 477 aaKnown RBP eCLIP17.19■□□□□ 0.34
NELFCD-209ENST00000486263 MASTLQ96GX5 879 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
NELFCD-209ENST00000486263 APBB1O00213 710 aa17.18■□□□□ 0.34
NELFCD-209ENST00000486263 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
NELFCD-209ENST00000486263 SRGNP10124 158 aa17.18■□□□□ 0.34
NELFCD-209ENST00000486263 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
NELFCD-209ENST00000486263 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
NELFCD-209ENST00000486263 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
NELFCD-209ENST00000486263 ARFGEF1Q9Y6D6 1849 aa17.17■□□□□ 0.34
NELFCD-209ENST00000486263 HOXA10P31260 410 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-209ENST00000486263 GRAPQ13588 217 aa17.17■□□□□ 0.34
NELFCD-209ENST00000486263 GRAPLQ8TC17 118 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-209ENST00000486263 CRAMP1Q96RY5 1269 aa17.17■□□□□ 0.34
NELFCD-209ENST00000486263 TMX4Q9H1E5 349 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-209ENST00000486263 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
NELFCD-209ENST00000486263 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
NELFCD-209ENST00000486263 EYA2O00167 538 aa17.16■□□□□ 0.34
NELFCD-209ENST00000486263 CHRNA5P30532 468 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms