RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 GNAI2P04899 355 aa28.59■■■□□ 2.17
NBPF3-212ENST00000486229 CTSWP56202 376 aa28.59■■■□□ 2.17
NBPF3-212ENST00000486229 CRY2Q49AN0 593 aa28.59■■■□□ 2.17
NBPF3-212ENST00000486229 RBM17Q96I25 401 aaKnown RBP28.59■■■□□ 2.17
NBPF3-212ENST00000486229 ALDH1B1P30837 517 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 AAMPQ13685 434 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 STYK1Q6J9G0 422 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 SYNE4Q8N205 404 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 JARID2Q92833 1246 aaPredicted RBP28.58■■■□□ 2.17
NBPF3-212ENST00000486229 CNKSR1Q969H4 720 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 MEIS3Q99687 375 aa28.58■■■□□ 2.17
NBPF3-212ENST00000486229 ZBTB7BO15156 539 aaPredicted RBP28.57■■■□□ 2.16
NBPF3-212ENST00000486229 SRGNP10124 158 aa28.57■■■□□ 2.16
NBPF3-212ENST00000486229 DDX46Q7L014 1031 aaKnown RBP28.57■■■□□ 2.16
NBPF3-212ENST00000486229 DLEC1Q9Y238 1755 aa28.56■■■□□ 2.16
NBPF3-212ENST00000486229 TNRC6CQ9HCJ0 1690 aaKnown RBP28.55■■■□□ 2.16
NBPF3-212ENST00000486229 HOXA10P31260 410 aaPredicted RBP28.55■■■□□ 2.16
NBPF3-212ENST00000486229 PIM2Q9P1W9 311 aa28.55■■■□□ 2.16
NBPF3-212ENST00000486229 RTL9Q8NET4 1388 aa28.54■■■□□ 2.16
NBPF3-212ENST00000486229 C20orf194Q5TEA3 1177 aa28.54■■■□□ 2.16
NBPF3-212ENST00000486229 TTLL11Q8NHH1 800 aa28.54■■■□□ 2.16
NBPF3-212ENST00000486229 ZNF622Q969S3 477 aaKnown RBP eCLIP28.54■■■□□ 2.16
NBPF3-212ENST00000486229 SUCLG2Q96I99 432 aa28.54■■■□□ 2.16
NBPF3-212ENST00000486229 CRAMP1Q96RY5 1269 aa28.54■■■□□ 2.16
NBPF3-212ENST00000486229 CSF1RP07333 972 aa28.53■■■□□ 2.16
NBPF3-212ENST00000486229 DPEP1P16444 411 aa28.53■■■□□ 2.16
NBPF3-212ENST00000486229 CDC5LQ99459 802 aaKnown RBP28.53■■■□□ 2.16
NBPF3-212ENST00000486229 TMX4Q9H1E5 349 aaPredicted RBP28.53■■■□□ 2.16
NBPF3-212ENST00000486229 RABL6Q3YEC7 729 aaPredicted RBP28.52■■■□□ 2.16
NBPF3-212ENST00000486229 TMC4Q7Z404 712 aa28.52■■■□□ 2.16
NBPF3-212ENST00000486229 CHMP3Q9Y3E7 222 aa28.52■■■□□ 2.16
NBPF3-212ENST00000486229 LRRFIP2Q9Y608 721 aaKnown RBP28.52■■■□□ 2.16
NBPF3-212ENST00000486229 A0A0G2JLW4 131 aa28.51■■■□□ 2.15
NBPF3-212ENST00000486229 FOXO4P98177 505 aa28.51■■■□□ 2.15
NBPF3-212ENST00000486229 CCDC57Q2TAC2 916 aa28.51■■■□□ 2.15
NBPF3-212ENST00000486229 LMBR1LQ6UX01 489 aa28.51■■■□□ 2.15
NBPF3-212ENST00000486229 TTLL6Q8N841 843 aa28.51■■■□□ 2.15
NBPF3-212ENST00000486229 BICC1Q9H694 974 aaKnown RBP28.51■■■□□ 2.15
NBPF3-212ENST00000486229 COL11A2P13942 1736 aaPredicted RBP28.5■■■□□ 2.15
NBPF3-212ENST00000486229 HSPA6P17066 643 aa28.5■■■□□ 2.15
NBPF3-212ENST00000486229 CHRNA5P30532 468 aa28.5■■■□□ 2.15
NBPF3-212ENST00000486229 IFIT5Q13325 482 aaKnown RBP28.5■■■□□ 2.15
NBPF3-212ENST00000486229 KIAA1551Q9HCM1 1747 aa28.49■■■□□ 2.15
NBPF3-212ENST00000486229 ANKRD18BA2A2Z9 1011 aa28.49■■■□□ 2.15
NBPF3-212ENST00000486229 BBOX1O75936 387 aa28.49■■■□□ 2.15
NBPF3-212ENST00000486229 NEFLP07196 543 aa28.48■■■□□ 2.15
NBPF3-212ENST00000486229 GRAPQ13588 217 aa28.48■■■□□ 2.15
NBPF3-212ENST00000486229 DALRD3Q5D0E6 543 aaKnown RBP28.48■■■□□ 2.15
NBPF3-212ENST00000486229 GRAPLQ8TC17 118 aaPredicted RBP28.48■■■□□ 2.15
NBPF3-212ENST00000486229 ZBTB40Q9NUA8 1239 aa28.48■■■□□ 2.15
NBPF3-212ENST00000486229 TAF7LQ5H9L4 462 aa28.47■■■□□ 2.15
NBPF3-212ENST00000486229 SOGA3Q5TF21 947 aa28.47■■■□□ 2.15
NBPF3-212ENST00000486229 C3orf67Q6ZVT6 689 aa28.47■■■□□ 2.15
NBPF3-212ENST00000486229 KAZALD1Q96I82 304 aa28.47■■■□□ 2.15
NBPF3-212ENST00000486229 GPBP1L1Q9HC44 474 aaPredicted RBP28.47■■■□□ 2.15
NBPF3-212ENST00000486229 ITGA6P23229 1130 aa28.46■■■□□ 2.15
NBPF3-212ENST00000486229 IGHMBP2P38935 993 aaKnown RBP28.46■■■□□ 2.15
NBPF3-212ENST00000486229 MTX1Q13505 466 aa28.46■■■□□ 2.15
NBPF3-212ENST00000486229 ANKRD18AQ8IVF6 992 aa28.46■■■□□ 2.15
NBPF3-212ENST00000486229 GREM2Q9H772 168 aa28.46■■■□□ 2.15
NBPF3-212ENST00000486229 BRCA1P38398 1863 aaKnown RBP28.46■■■□□ 2.15
NBPF3-212ENST00000486229 GRIPAP1Q4V328 841 aa28.45■■■□□ 2.14
NBPF3-212ENST00000486229 EPHA10Q5JZY3 1008 aa28.45■■■□□ 2.14
NBPF3-212ENST00000486229 RPAP2Q8IXW5 612 aaPredicted RBP28.45■■■□□ 2.14
NBPF3-212ENST00000486229 ANKRD44Q8N8A2 993 aa28.45■■■□□ 2.14
NBPF3-212ENST00000486229 CRBNQ96SW2 442 aa28.45■■■□□ 2.14
NBPF3-212ENST00000486229 KCNA3P22001 575 aa28.44■■■□□ 2.14
NBPF3-212ENST00000486229 RPS8P62241 208 aaKnown RBP28.44■■■□□ 2.14
NBPF3-212ENST00000486229 FAM161AQ3B820 660 aa28.44■■■□□ 2.14
NBPF3-212ENST00000486229 CC2D2BQ6DHV5 1058 aa28.44■■■□□ 2.14
NBPF3-212ENST00000486229 CCDC85AQ96PX6 553 aaPredicted RBP28.44■■■□□ 2.14
NBPF3-212ENST00000486229 HMMRO75330 724 aa28.43■■■□□ 2.14
NBPF3-212ENST00000486229 MPHOSPH8Q99549 860 aa28.43■■■□□ 2.14
NBPF3-212ENST00000486229 PRPF40BQ6NWY9 871 aaKnown RBP28.42■■■□□ 2.14
NBPF3-212ENST00000486229 CACNA1SQ13698 1873 aa28.42■■■□□ 2.14
NBPF3-212ENST00000486229 PPEF1O14829 653 aaPredicted RBP28.41■■■□□ 2.14
NBPF3-212ENST00000486229 SRGAP3O43295 1099 aa28.41■■■□□ 2.14
NBPF3-212ENST00000486229 ATP8B2P98198 1209 aa28.41■■■□□ 2.14
NBPF3-212ENST00000486229 FBXO3Q9UK99 471 aa28.41■■■□□ 2.14
NBPF3-212ENST00000486229 SEC31BQ9NQW1 1179 aa28.4■■■□□ 2.14
NBPF3-212ENST00000486229 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.14
NBPF3-212ENST00000486229 BSDC1Q9NW68 430 aaPredicted RBP28.39■■■□□ 2.14
NBPF3-212ENST00000486229 BCS1LQ9Y276 419 aa28.39■■■□□ 2.14
NBPF3-212ENST00000486229 SP8Q8IXZ3 490 aa28.38■■■□□ 2.13
NBPF3-212ENST00000486229 CELF1Q92879 486 aaKnown RBP28.38■■■□□ 2.13
NBPF3-212ENST00000486229 C1orf115Q9H7X2 142 aa28.38■■■□□ 2.13
NBPF3-212ENST00000486229 ATP6V0A2Q9Y487 856 aa28.37■■■□□ 2.13
NBPF3-212ENST00000486229 SLX4Q8IY92 1834 aa28.36■■■□□ 2.13
NBPF3-212ENST00000486229 CEP85Q6P2H3 762 aa28.36■■■□□ 2.13
NBPF3-212ENST00000486229 LDHAL6AQ6ZMR3 332 aa28.36■■■□□ 2.13
NBPF3-212ENST00000486229 KIF3CO14782 793 aa28.35■■■□□ 2.13
NBPF3-212ENST00000486229 RTKN2Q8IZC4 609 aa28.35■■■□□ 2.13
NBPF3-212ENST00000486229 CNNM1Q9NRU3 951 aa28.35■■■□□ 2.13
NBPF3-212ENST00000486229 TAF1P21675 1872 aa28.35■■■□□ 2.13
NBPF3-212ENST00000486229 CCDC93Q567U6 631 aa28.34■■■□□ 2.13
NBPF3-212ENST00000486229 SSH3Q8TE77 659 aa28.34■■■□□ 2.13
NBPF3-212ENST00000486229 COPRSQ9NQ92 184 aa28.34■■■□□ 2.13
NBPF3-212ENST00000486229 EXOC6Q8TAG9 804 aa28.33■■■□□ 2.13
NBPF3-212ENST00000486229 ZNF526Q8TF50 670 aaPredicted RBP28.33■■■□□ 2.13
NBPF3-212ENST00000486229 ANKRD2Q9GZV1 360 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms